Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0175
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    26   0.31 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   1.7  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   1.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   3.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.7  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 217 AVFCNNYKQILDYYKSIDLLNSYRLQSIFLVVQINVTLQKVSSTCMSFC 71
           AVF    +Q   YY +   ++S  +Q+I ++    + L+KV   C +FC
Sbjct: 124 AVFSKQIRQEKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFC 172


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 512 TCILG*TTLYLIVLHIW 562
           T ILG T +YL  L+IW
Sbjct: 36  TVILGTTCIYLTSLYIW 52


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 512 TCILG*TTLYLIVLHIW 562
           T ILG T +YL  L+IW
Sbjct: 36  TVILGTTCIYLTSLYIW 52


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 196 YSCCKILRAALICVSDQSVYVSMWATYM*LKLSTDSLV 309
           Y+ CK L+A  IC   ++  + + A ++    ++  LV
Sbjct: 170 YAICKPLKAGYICTKTRASLICLLAWFIAALFTSPMLV 207


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 196 YSCCKILRAALICVSDQSVYVSMWATYM 279
           Y+ CK L+A  IC   ++  + + A ++
Sbjct: 170 YAICKPLKAGYICTKTRASLICLLAWFI 197


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -2

Query: 276 ICSPH*HVYRLVTHTNKGGAQYFATTINKF*IIINQSIFLTLI 148
           IC+ H H+ +LVT  N+              ++I Q+IF+  +
Sbjct: 578 ICTLHHHLSKLVTRFNEIFGLGLLLMFGVSFLLITQTIFIICV 620


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 172 IYNNLKFVYSCCKIL 216
           IY ++K VY+ CK++
Sbjct: 21  IYTSMKPVYAICKLI 35


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 172 IYNNLKFVYSCCKIL 216
           IY ++K VY+ CK++
Sbjct: 21  IYTSMKPVYAICKLI 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,703
Number of Sequences: 336
Number of extensions: 4306
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)