Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0175
         (817 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M74078-1|AAA28498.1|  878|Drosophila melanogaster ecdysone recep...    30   4.4  
BT015234-1|AAT94463.1|  878|Drosophila melanogaster RE06878p pro...    30   4.4  
BT012469-1|AAS93740.1|  878|Drosophila melanogaster RE33854p pro...    30   4.4  
AE013599-153|AAF57280.2|  878|Drosophila melanogaster CG1765-PB,...    30   4.4  

>M74078-1|AAA28498.1|  878|Drosophila melanogaster ecdysone receptor
           protein.
          Length = 878

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 365 TRAHTLQQLYNSITELAYLMCSKRLPN*LILIPLH-RQNINGGEKAGNVV 511
           +  H L Q   S+  LA   CS  LP    +IP++   N NGG   G  V
Sbjct: 65  SNGHGLSQQQQSVITLAMHGCSSTLPAQTTIIPINGNANGNGGSTNGQYV 114


>BT015234-1|AAT94463.1|  878|Drosophila melanogaster RE06878p
           protein.
          Length = 878

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 365 TRAHTLQQLYNSITELAYLMCSKRLPN*LILIPLH-RQNINGGEKAGNVV 511
           +  H L Q   S+  LA   CS  LP    +IP++   N NGG   G  V
Sbjct: 65  SNGHGLSQQQQSVITLAMHGCSSTLPAQTTIIPINGNANGNGGSTNGQYV 114


>BT012469-1|AAS93740.1|  878|Drosophila melanogaster RE33854p
           protein.
          Length = 878

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 365 TRAHTLQQLYNSITELAYLMCSKRLPN*LILIPLH-RQNINGGEKAGNVV 511
           +  H L Q   S+  LA   CS  LP    +IP++   N NGG   G  V
Sbjct: 65  SNGHGLSQQQQSVITLAMHGCSSTLPAQTTIIPINGNANGNGGSTNGQYV 114


>AE013599-153|AAF57280.2|  878|Drosophila melanogaster CG1765-PB,
           isoform B protein.
          Length = 878

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +2

Query: 365 TRAHTLQQLYNSITELAYLMCSKRLPN*LILIPLH-RQNINGGEKAGNVV 511
           +  H L Q   S+  LA   CS  LP    +IP++   N NGG   G  V
Sbjct: 65  SNGHGLSQQQQSVITLAMHGCSSTLPAQTTIIPINGNANGNGGSTNGQYV 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,933,372
Number of Sequences: 53049
Number of extensions: 663114
Number of successful extensions: 1221
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)