Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0175
         (817 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    26   0.48 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    26   0.48 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          25   1.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.9  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   1.9  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   5.9  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   5.9  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   5.9  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 392 IVVAKYERAW-PLFVVVIVNTNFR*CVYPTKLSV 294
           I+V  +   W P F + +V    R C++PT  SV
Sbjct: 13  IIVGGFILCWLPFFTMYLVRAFCRNCIHPTVFSV 46


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 392 IVVAKYERAW-PLFVVVIVNTNFR*CVYPTKLSV 294
           I+V  +   W P F + +V    R C++PT  SV
Sbjct: 461 IIVGGFILCWLPFFTMYLVRAFCRNCIHPTVFSV 494


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 421 NVLKTTPELIDLNPTSPSKYKRRGES 498
           N++  TPEL+ L P+  S +   GE+
Sbjct: 367 NMMMITPELLGLMPSGSSVHSDSGEN 392


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -1

Query: 223 RRAVFCNNYKQILDYY-KSIDLLNSYRLQSI-FLVVQI-NVTLQKV 95
           R  VF + YK ILDYY K  + L  Y  + + F  V I +VT+ K+
Sbjct: 413 RDPVFFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKL 458


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -1

Query: 223 RRAVFCNNYKQILDYY-KSIDLLNSYRLQSI-FLVVQI-NVTLQKV 95
           R  VF + YK ILDYY K  + L  Y  + + F  V I +VT+ K+
Sbjct: 413 RDPVFFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKL 458


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -1

Query: 223 RRAVFCNNYKQILDYY-KSIDLLNSYRLQSI-FLVVQI-NVTLQKV 95
           R  VF + YK ILDYY K  + L  Y  + + F  V I +VT+ K+
Sbjct: 39  RDPVFFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKL 84


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +3

Query: 306 SRVHTLTKICIYDYNYK*RPRALILCNNYTIVLQN 410
           S+ H +      +YNY       + CNNY  +  N
Sbjct: 76  SKEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYN 110


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +3

Query: 306 SRVHTLTKICIYDYNYK*RPRALILCNNYTIVLQN 410
           S+ H +      +YNY       + CNNY  +  N
Sbjct: 76  SKEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYN 110


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +3

Query: 306 SRVHTLTKICIYDYNYK*RPRALILCNNYTIVLQN 410
           S+ H +      +YNY       + CNNY  +  N
Sbjct: 76  SKEHKIISSLSNNYNYNNNNYKKLYCNNYRKLYYN 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,054
Number of Sequences: 438
Number of extensions: 5200
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)