Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0172
(548 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces... 92 4e-20
SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces... 29 0.45
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 27 1.8
SPAC1B3.01c |||uracil phosphoribosyltransferase |Schizosaccharom... 27 2.4
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 27 2.4
SPBC405.03c |||membrane transporter |Schizosaccharomyces pombe|c... 26 3.2
SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces p... 26 3.2
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 26 4.2
SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces pombe... 26 4.2
SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyce... 25 5.6
SPAC22H10.06c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 7.3
SPCC188.02 |par1||protein phosphatase regulatory subunit Par1 |S... 25 7.3
SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces pomb... 25 9.7
>SPAC26F1.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 356
Score = 92.3 bits (219), Expect = 4e-20
Identities = 48/131 (36%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Frame = +1
Query: 22 SNIRKGGAIGTIRNISFDTDYHEFLVSPD-LDLLTYILYPLMGNEDYPDDEMETLPVTLQ 198
S +R+ G I+NISFD + + L+ + +++L Y+L PL G E+ +++M+ + LQ
Sbjct: 203 SLLRRTGVAAIIKNISFDIPFQKVLMDEEGINVLPYLLLPLAGPEELSEEDMDGMFDELQ 262
Query: 199 YLPKEKRREPDIDIRILILETLNKLCAQRRGRQYLRENGVYYIMREYHKWEKDPKALIAC 378
LP +K+REPD I ++ETL L A R GR+++R VY I+RE H D + C
Sbjct: 263 LLPDDKKREPDHFIMKTLVETLVLLTATREGREHMRRRKVYPIIRELHLNVDDEEIREVC 322
Query: 379 ENVVDILIQKE 411
+ +V +L++ E
Sbjct: 323 DQLVQMLVRDE 333
>SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 857
Score = 29.1 bits (62), Expect = 0.45
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -3
Query: 414 VFLLNQYIHYILTRYQSFRVFFPFMIFSHYIVHSVLA-*ILSASTLSTQFV 265
V + +Y + RYQSF F+P +FS+ + +LA ++++ TL T F+
Sbjct: 332 VSVAERYANEFFLRYQSFFYFYPPSVFSNR--YQILADGLVNSDTLDTGFL 380
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +1
Query: 334 EYHKWEKDPKALIACENVVDILIQKEDEVGAEDLSTVEVPEELRERFNKTNSDFMMNL 507
E H W K A + + +++D + D + VPE +RER + F +++
Sbjct: 299 EDHSWANYVKVNKAFADTIVDNYEQDDMIWINDYHLLLVPEMVRERLPRAKIGFFLHI 356
>SPAC1B3.01c |||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 219
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 325 IMREYHKWEKDPKALIACENVVDILIQKEDEVGAEDLSTVEVPEELRERF 474
IMR E+ + + ILIQ+++E L +++PE++ +R+
Sbjct: 84 IMRAGESMEQGLRECCRSVRIGKILIQRDEETHKPVLHYIKLPEDISKRY 133
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +1
Query: 64 ISFDTDYHEFLVSPDLDLLTYILYPLMGNEDYPDDEMETLPVTLQYLPKEKRREPDIDIR 243
+S TD F+ + + L T + + +P + V E P + +R
Sbjct: 279 VSASTDSASFMENAKVALTTLFWIGVRSQQTFPTTTLPPSVVADSLASSEGNPTPMLAVR 338
Query: 244 ILILETLNK 270
L +ETLNK
Sbjct: 339 DLPIETLNK 347
>SPBC405.03c |||membrane transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 3.2
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 355 LFPIYDILSLYSTLRSRV--NTVCLYVEHTICSVSPVSEYVCLYQALSASPLVNTV 194
L+P IL LY R + T L V S++ VS+Y+ + L SPL+ TV
Sbjct: 239 LWPFLIILHLYGVERFSLPSTTAGLIVLIINASITFVSDYLWVIAMLMTSPLLVTV 294
>SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 303
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 172 METLPVTLQYLPKEKRREPDID-IRILILETLNKLCAQRRGRQYLRENGVYYIMRE 336
++ L L+++ E+ R+ + I I E +L A R R++ NGV ++RE
Sbjct: 49 IKLLATNLEWITVEEERDYLVSTICERIAERSGRLAAPTRKREFSLSNGVSVVLRE 104
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 58 RNISFDTDYHEFLVSPDLDLLTYILYP 138
R + F T + L+SP++DL T+I+ P
Sbjct: 311 RRLVFQTITAKMLLSPEVDLDTFIMRP 337
>SPBC2G2.11 |||N-myristoyltransferase 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 522 NNSLLQIHHKITIGFIESFPQFLRYFYC*QVLRTDLV 412
+N L ++H +T ++E LR+ Y + LR L+
Sbjct: 102 DNELSEVHELLTENYVEDATAMLRFAYISEFLRWALM 138
>SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 202 LPKEKRREPDIDIRILILETLNKLCAQRRGR 294
L K+K E DI L+++ + K+ QRRGR
Sbjct: 301 LEKQKPTEADIKRWTLLVDKMIKVDPQRRGR 331
>SPAC22H10.06c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 93
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 292 CLYVEHTICSVSPVSEYVCLYQA 224
CLY H + S + +E + LY+A
Sbjct: 22 CLYTNHAVVSWNQTNEVIGLYKA 44
>SPCC188.02 |par1||protein phosphatase regulatory subunit Par1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 548
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 70 FDTDYHEFLVSPDLDLLTYILYPLM 144
F+ DY LV ++D++ I+YP +
Sbjct: 429 FNNDYFVHLVEENVDIILPIIYPAL 453
>SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 840
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1
Query: 115 LLTYILYPLMG 147
LL YILYPLMG
Sbjct: 124 LLPYILYPLMG 134
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,242,769
Number of Sequences: 5004
Number of extensions: 49408
Number of successful extensions: 136
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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