Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0172
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0147 + 13404711-13404764,13404865-13405232,13406105-134061... 46 2e-05
02_02_0284 - 8547126-8547187,8547306-8547395,8547810-8547861,854... 33 0.15
10_08_0290 + 16549048-16549262,16549770-16549833,16550106-165502... 25 2.3
03_05_1111 - 30479793-30479823,30479887-30479978,30480261-304804... 29 3.2
04_04_0339 - 24513699-24516827 28 4.3
12_02_1244 + 27302715-27302754,27302865-27302936,27303250-273034... 28 5.6
11_04_0176 - 14536305-14537315 28 5.6
09_02_0251 - 6282420-6282526,6282642-6283104,6283223-6283289,628... 28 5.6
12_02_0619 - 21276591-21276719,21276798-21276920,21277425-212775... 27 7.5
11_06_0311 - 22279202-22279690,22279976-22280103,22281249-222813... 27 7.5
08_01_0175 - 1497700-1498459,1498546-1499939 27 7.5
07_01_0008 - 56178-57095 27 7.5
10_08_0245 + 16138402-16138548,16138648-16138701,16139106-161391... 27 9.9
07_03_0499 - 18789924-18790106 27 9.9
>10_07_0147 +
13404711-13404764,13404865-13405232,13406105-13406153,
13406374-13406470,13406863-13407011,13407554-13407667,
13408196-13408327,13409143-13409256,13410233-13410454
Length = 432
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Frame = +1
Query: 22 SNIRKGGAIGTIRNISFDTDYH-EFLVSPDLDLLTYILYPLMGNEDYPDDEMETLPVTL- 195
+ +RK G + TIRN F+ D + L+S + +L P+ G + Y +++ +P L
Sbjct: 233 NQLRKKGVVSTIRNCCFEADTQIQNLLSLAEYIWPALLLPVAGKKIYSEEDRSKMPPELA 292
Query: 196 QYLPKEKRREPDIDIRILILETLNKLCAQRRGRQ-YLRENGVYYIMREYHKWEKDPKALI 372
L E+ + +IR LE + + Q GR+ + NG + Y E+DPK +
Sbjct: 293 NALSHEREAVENSEIRQQALEAIYMIVLQDEGRRAFWSVNGPRILQVGYED-EEDPKVME 351
Query: 373 ACE 381
A E
Sbjct: 352 AYE 354
>02_02_0284 -
8547126-8547187,8547306-8547395,8547810-8547861,
8548209-8548284,8550513-8550632,8553334-8553423,
8553842-8554024,8554125-8554185,8554437-8554477,
8554563-8554727,8555699-8555776,8556137-8556282
Length = 387
Score = 33.1 bits (72), Expect = 0.15
Identities = 23/54 (42%), Positives = 26/54 (48%)
Frame = +3
Query: 288 RQTVFTRERSVLYNERIS*MGKRPESFDSV*ECSGYTDSEGRRGRCGGPVNSRS 449
RQ VF RE +V+ KRPE S GY+D EGRR G SRS
Sbjct: 100 RQVVFGREITVVLAAESR---KRPEEMRSRARVRGYSDHEGRRSSHYGRSRSRS 150
>10_08_0290 +
16549048-16549262,16549770-16549833,16550106-16550267,
16550786-16550956,16551041-16551235,16551421-16551546,
16551648-16551809,16551953-16552120,16552223-16552435
Length = 491
Score = 25.0 bits (52), Expect(2) = 2.3
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 397 VYPLHSHTLSKLSGLFPIYDILSLYSTLRSRV 302
++P H + L++ +P +I+SLY + R+
Sbjct: 250 IFPHHENELAQSQAAYPESEIISLYHPMALRL 281
Score = 22.6 bits (46), Expect(2) = 2.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 328 LYSTLRSRVNTVCLYVEHTICSVSPVSE 245
+Y TL TV LY EH + + P +
Sbjct: 309 IYQTLHDGEETVSLYGEHKLENSIPADD 336
>03_05_1111 -
30479793-30479823,30479887-30479978,30480261-30480410,
30482229-30482354,30482563-30482628,30483134-30483214,
30483310-30483422,30483553-30483721,30484253-30484330,
30485489-30485752,30486239-30486379,30486548-30486759,
30486819-30486940,30487281-30487398,30487925-30487997
Length = 611
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -2
Query: 361 SGLFPIYDILSLYSTL 314
+GLFP +D+LSLYS L
Sbjct: 432 AGLFPTFDVLSLYSRL 447
>04_04_0339 - 24513699-24516827
Length = 1042
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = -2
Query: 400 SVYPLHSHTLSKLSGLFPIYDILSLYST 317
S++P+HS T +L+G+F D++ L S+
Sbjct: 410 SLFPVHSFTPEQLTGMFVADDLIKLSSS 437
>12_02_1244 +
27302715-27302754,27302865-27302936,27303250-27303423,
27303533-27303667,27304407-27304546,27304844-27304933,
27305064-27305186,27305590-27305742,27306032-27306148,
27306818-27306988,27307082-27307161,27307238-27307262
Length = 439
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 196 VK*QGVFPFRHQDNLRCPLRDTKCM*ADPSPGSLGTRGSLC 74
+K QG F+ QD L + T+ + DP G+L + SLC
Sbjct: 326 MKQQGDAAFKKQDYLNASVFYTQALKVDPFDGTLFSNRSLC 366
>11_04_0176 - 14536305-14537315
Length = 336
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 409 PSESVYPLHSHTLSKLSGLFPIYDILSLYSTLRS 308
PS+ +PL H L G IY L LY +L S
Sbjct: 82 PSDEHHPLLEHNPHDLVGFLEIYPKLELYESLPS 115
>09_02_0251 -
6282420-6282526,6282642-6283104,6283223-6283289,
6283536-6283808,6284096-6284907,6285402-6285479,
6285586-6285636,6285737-6285817,6285903-6285982,
6288481-6288652
Length = 727
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 322 YIMREYHKWEKDPKALIACENVVDILIQ-KEDEVGAEDLSTVEVPEELRERFNKTNSD 492
Y++ E + +K +++A E + L+ ED + AED + E EE + + +TN +
Sbjct: 597 YLLEEMDRLDKHIDSMLAQEEQITTLVDIAEDSMIAEDETITEPNEEEQLQEKETNEE 654
>12_02_0619 -
21276591-21276719,21276798-21276920,21277425-21277535,
21277887-21277901,21279117-21279188
Length = 149
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 406 KEDEVGAEDLSTVEVPEELRERFNKT 483
K E+GA+ L TVE+ L E FN T
Sbjct: 96 KFSELGADSLDTVEIVMGLEEEFNIT 121
>11_06_0311 -
22279202-22279690,22279976-22280103,22281249-22281355,
22282799-22282888,22283590-22283660
Length = 294
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +1
Query: 127 ILYPLMGNEDYPDDEMETLPVTLQYLPKEKR--REPDIDIRILILETLNKLCAQRRGRQY 300
+L L+ + E L QY+ E +E +I +R ILE N++CA R G +
Sbjct: 108 VLRDLVSQVESLRKEQSALLTERQYVGSENNELQEENIMLRAQILELHNEICA-RMGNNH 166
Query: 301 LRENGV 318
L ++ +
Sbjct: 167 LNQSNL 172
>08_01_0175 - 1497700-1498459,1498546-1499939
Length = 717
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = -2
Query: 466 PSIPQVLLLLTGPPHRPRLPSESVYPLHSHTLSKLSGLFPIYDILSLYSTLRSRVNTVCL 287
PSI + +L P LP++ P ++ ++ + GLF + L S+ +T
Sbjct: 630 PSIRAAMAMLQSSGQLPVLPAKMPVPTYAPPVASVEGLFTSSTGM-LSSSATQSSSTTSG 688
Query: 286 YVEHTICS 263
Y+ HT S
Sbjct: 689 YITHTSSS 696
>07_01_0008 - 56178-57095
Length = 305
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -2
Query: 445 LLLTGPPHRPRLPSESVYPLHSHTLSKLSGLFPIYDILSL-YSTLRSR 305
LL T PPHRP+ YP S + G + +L + YS L +R
Sbjct: 215 LLTTPPPHRPQPHPHHYYPWLSLLFAAACGAMLTFFLLFVWYSLLATR 262
>10_08_0245 +
16138402-16138548,16138648-16138701,16139106-16139171,
16139427-16139483,16140490-16140610,16140704-16140744,
16140835-16140886,16141555-16141623,16141697-16141768,
16141890-16142045,16143067-16143284,16143359-16143398,
16143484-16143602,16143726-16143827,16144256-16144300,
16144890-16145030,16145172-16145267,16145415-16145516,
16145611-16145709
Length = 598
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 199 YLPKEKRREPDIDIRILILETLNKLCAQRRGRQYLRENGVYYIMREYHKWEKDPKALIAC 378
Y K + + P + I+ L ++ + RG + + + Y++ Y+K EK + +A
Sbjct: 14 YKRKPQHKMPKLPIKSLHID--GNCRVEDRGLK-MHHGHMLYVLCVYNKREKHQRITMAA 70
Query: 379 ENVVDILIQKE 411
N+ + LI KE
Sbjct: 71 FNIQEALIWKE 81
>07_03_0499 - 18789924-18790106
Length = 60
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 390 GYTDSEGRRGRCGGPVNSRST*GIEG 467
G D+E RGRCG V+S+ G++G
Sbjct: 24 GMDDAEEGRGRCGADVDSKD--GVDG 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,727,879
Number of Sequences: 37544
Number of extensions: 285926
Number of successful extensions: 773
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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