Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0172
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009915-1|AAH09915.1| 390|Homo sapiens chromosome 8 open readi... 168 1e-41
BC003035-1|AAH03035.1| 390|Homo sapiens chromosome 8 open readi... 168 1e-41
BC015471-1|AAH15471.1| 256|Homo sapiens C8orf30A protein protein. 167 3e-41
U77970-1|AAB47250.1| 824|Homo sapiens neuronal PAS2 protein. 33 0.66
U51625-1|AAC51211.1| 626|Homo sapiens MOP4 protein. 33 0.66
EF015903-1|ABM64214.1| 824|Homo sapiens neuronal PAS domain pro... 33 0.66
BC072383-1|AAH72383.1| 824|Homo sapiens neuronal PAS domain pro... 33 0.66
BC051351-1|AAH51351.2| 824|Homo sapiens neuronal PAS domain pro... 33 0.66
BC028107-1|AAH28107.1| 622|Homo sapiens NPAS2 protein protein. 33 0.66
AC016738-1|AAY14822.1| 813|Homo sapiens unknown protein. 33 0.66
D78586-1|BAA11423.1| 2225|Homo sapiens multifunctional protein C... 32 1.2
BC065510-1|AAH65510.1| 2225|Homo sapiens carbamoyl-phosphate syn... 32 1.2
AC013403-10|AAX93165.1| 74|Homo sapiens unknown protein. 32 1.2
EF015897-1|ABM64208.1| 846|Homo sapiens CLOCK protein. 32 1.5
BC126159-1|AAI26160.1| 846|Homo sapiens clock homolog (mouse) p... 32 1.5
BC126157-1|AAI26158.1| 846|Homo sapiens clock homolog (mouse) p... 32 1.5
BC041878-1|AAH41878.1| 846|Homo sapiens CLOCK protein protein. 32 1.5
AK223549-1|BAD97269.1| 846|Homo sapiens clock variant protein. 32 1.5
AF097458-1|AAF13733.1| 845|Homo sapiens clock protein. 32 1.5
AF011568-1|AAB83969.1| 846|Homo sapiens CLOCK protein. 32 1.5
AB002332-1|BAA20792.2| 848|Homo sapiens KIAA0334 protein. 32 1.5
>BC009915-1|AAH09915.1| 390|Homo sapiens chromosome 8 open reading
frame 30A protein.
Length = 390
Score = 168 bits (408), Expect = 1e-41
Identities = 72/160 (45%), Positives = 109/160 (68%)
Frame = +1
Query: 1 PFCNYDVSNIRKGGAIGTIRNISFDTDYHEFLVSPDLDLLTYILYPLMGNEDYPDDEMET 180
P Y S++R+GG +GT+RN F+ +HE+L+ P++D+L ++L PL G ED+ ++EME
Sbjct: 206 PLTQYPDSSVRRGGVVGTLRNCCFEHRHHEWLLGPEVDILPFLLLPLAGPEDFSEEEMER 265
Query: 181 LPVTLQYLPKEKRREPDIDIRILILETLNKLCAQRRGRQYLRENGVYYIMREYHKWEKDP 360
LPV LQYLP +K+REPD DIR +++E + L A GRQ +R+ G Y I+RE H WE +P
Sbjct: 266 LPVDLQYLPPDKQREPDADIRKMLVEAIMLLTATAPGRQQVRDQGAYLILRELHSWEPEP 325
Query: 361 KALIACENVVDILIQKEDEVGAEDLSTVEVPEELRERFNK 480
ACE ++ +LI E E G E+L V+VPE++ ++ +
Sbjct: 326 DVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVEQQLQQ 365
>BC003035-1|AAH03035.1| 390|Homo sapiens chromosome 8 open reading
frame 30A protein.
Length = 390
Score = 168 bits (408), Expect = 1e-41
Identities = 72/160 (45%), Positives = 109/160 (68%)
Frame = +1
Query: 1 PFCNYDVSNIRKGGAIGTIRNISFDTDYHEFLVSPDLDLLTYILYPLMGNEDYPDDEMET 180
P Y S++R+GG +GT+RN F+ +HE+L+ P++D+L ++L PL G ED+ ++EME
Sbjct: 206 PLTQYPDSSVRRGGVVGTLRNCCFEHRHHEWLLGPEVDILPFLLLPLAGPEDFSEEEMER 265
Query: 181 LPVTLQYLPKEKRREPDIDIRILILETLNKLCAQRRGRQYLRENGVYYIMREYHKWEKDP 360
LPV LQYLP +K+REPD DIR +++E + L A GRQ +R+ G Y I+RE H WE +P
Sbjct: 266 LPVDLQYLPPDKQREPDADIRKMLVEAIMLLTATAPGRQQVRDQGAYLILRELHSWEPEP 325
Query: 361 KALIACENVVDILIQKEDEVGAEDLSTVEVPEELRERFNK 480
ACE ++ +LI E E G E+L V+VPE++ ++ +
Sbjct: 326 DVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVEQQLQQ 365
>BC015471-1|AAH15471.1| 256|Homo sapiens C8orf30A protein protein.
Length = 256
Score = 167 bits (405), Expect = 3e-41
Identities = 71/160 (44%), Positives = 109/160 (68%)
Frame = +1
Query: 1 PFCNYDVSNIRKGGAIGTIRNISFDTDYHEFLVSPDLDLLTYILYPLMGNEDYPDDEMET 180
P Y S++R+GG +GT+RN F+ +HE+L+ P++D+L ++L PL G ED+ ++EM+
Sbjct: 72 PLTQYPDSSVRRGGVVGTLRNCCFEHRHHEWLLGPEVDILPFLLLPLAGPEDFSEEEMQR 131
Query: 181 LPVTLQYLPKEKRREPDIDIRILILETLNKLCAQRRGRQYLRENGVYYIMREYHKWEKDP 360
LPV LQYLP +K+REPD DIR +++E + L A GRQ +R+ G Y I+RE H WE +P
Sbjct: 132 LPVDLQYLPPDKQREPDADIRKMLVEAIMLLTATAPGRQQVRDQGAYLILRELHSWEPEP 191
Query: 361 KALIACENVVDILIQKEDEVGAEDLSTVEVPEELRERFNK 480
ACE ++ +LI E E G E+L V+VPE++ ++ +
Sbjct: 192 DVRTACEKLIQVLIGDEPERGMENLLEVQVPEDVEQQLQQ 231
>U77970-1|AAB47250.1| 824|Homo sapiens neuronal PAS2 protein.
Length = 824
Score = 33.1 bits (72), Expect = 0.66
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +1
Query: 268 KLCAQR---RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAE 429
K C R +G+Q++ YYI YH+W P+ ++ +VV D+ +++ E+ E
Sbjct: 310 KSCCYRFLTKGQQWIWLQTHYYIT--YHQWNSKPEFIVCTHSVVSYADVRVERRQELALE 367
Query: 430 D 432
D
Sbjct: 368 D 368
>U51625-1|AAC51211.1| 626|Homo sapiens MOP4 protein.
Length = 626
Score = 33.1 bits (72), Expect = 0.66
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +1
Query: 268 KLCAQR---RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAE 429
K C R +G+Q++ YYI YH+W P+ ++ +VV D+ +++ E+ E
Sbjct: 310 KSCCYRFLTKGQQWIWLQTHYYIT--YHQWNSKPEFIVCTHSVVSYADVRVERRQELALE 367
Query: 430 D 432
D
Sbjct: 368 D 368
>EF015903-1|ABM64214.1| 824|Homo sapiens neuronal PAS domain
protein 2 protein.
Length = 824
Score = 33.1 bits (72), Expect = 0.66
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +1
Query: 268 KLCAQR---RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAE 429
K C R +G+Q++ YYI YH+W P+ ++ +VV D+ +++ E+ E
Sbjct: 310 KSCCYRFLTKGQQWIWLQTHYYIT--YHQWNSKPEFIVCTHSVVSYADVRVERRQELALE 367
Query: 430 D 432
D
Sbjct: 368 D 368
>BC072383-1|AAH72383.1| 824|Homo sapiens neuronal PAS domain
protein 2 protein.
Length = 824
Score = 33.1 bits (72), Expect = 0.66
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +1
Query: 268 KLCAQR---RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAE 429
K C R +G+Q++ YYI YH+W P+ ++ +VV D+ +++ E+ E
Sbjct: 310 KSCCYRFLTKGQQWIWLQTHYYIT--YHQWNSKPEFIVCTHSVVSYADVRVERRQELALE 367
Query: 430 D 432
D
Sbjct: 368 D 368
>BC051351-1|AAH51351.2| 824|Homo sapiens neuronal PAS domain
protein 2 protein.
Length = 824
Score = 33.1 bits (72), Expect = 0.66
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +1
Query: 268 KLCAQR---RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAE 429
K C R +G+Q++ YYI YH+W P+ ++ +VV D+ +++ E+ E
Sbjct: 310 KSCCYRFLTKGQQWIWLQTHYYIT--YHQWNSKPEFIVCTHSVVSYADVRVERRQELALE 367
Query: 430 D 432
D
Sbjct: 368 D 368
>BC028107-1|AAH28107.1| 622|Homo sapiens NPAS2 protein protein.
Length = 622
Score = 33.1 bits (72), Expect = 0.66
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +1
Query: 268 KLCAQR---RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAE 429
K C R +G+Q++ YYI YH+W P+ ++ +VV D+ +++ E+ E
Sbjct: 310 KSCCYRFLTKGQQWIWLQTHYYIT--YHQWNSKPEFIVCTHSVVSYADVRVERRQELALE 367
Query: 430 D 432
D
Sbjct: 368 D 368
>AC016738-1|AAY14822.1| 813|Homo sapiens unknown protein.
Length = 813
Score = 33.1 bits (72), Expect = 0.66
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +1
Query: 268 KLCAQR---RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAE 429
K C R +G+Q++ YYI YH+W P+ ++ +VV D+ +++ E+ E
Sbjct: 299 KSCCYRFLTKGQQWIWLQTHYYIT--YHQWNSKPEFIVCTHSVVSYADVRVERRQELALE 356
Query: 430 D 432
D
Sbjct: 357 D 357
>D78586-1|BAA11423.1| 2225|Homo sapiens multifunctional protein CAD
protein.
Length = 2225
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +1
Query: 37 GGAIGTIRNISFDTD---YHEFLVSPDLDLLTYIL-YPLMGNEDYPDDEME 177
G A+ T + F T Y E L P +L YPL+GN P DEM+
Sbjct: 18 GAAVSTAGEVVFQTGMVGYPEALTDPSYKAQILVLTYPLIGNYGIPPDEMD 68
>BC065510-1|AAH65510.1| 2225|Homo sapiens carbamoyl-phosphate
synthetase 2, aspartate transcarbamylase, and
dihydroorotas protein.
Length = 2225
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +1
Query: 37 GGAIGTIRNISFDTD---YHEFLVSPDLDLLTYIL-YPLMGNEDYPDDEME 177
G A+ T + F T Y E L P +L YPL+GN P DEM+
Sbjct: 18 GAAVSTAGEVVFQTGMVGYPEALTDPSYKAQILVLTYPLIGNYGIPPDEMD 68
>AC013403-10|AAX93165.1| 74|Homo sapiens unknown protein.
Length = 74
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +1
Query: 37 GGAIGTIRNISFDTD---YHEFLVSPDLDLLTYIL-YPLMGNEDYPDDEME 177
G A+ T + F T Y E L P +L YPL+GN P DEM+
Sbjct: 18 GAAVSTAGEVVFQTGMVGYPEALTDPSYKAQILVLTYPLIGNYGIPPDEMD 68
>EF015897-1|ABM64208.1| 846|Homo sapiens CLOCK protein.
Length = 846
Score = 31.9 bits (69), Expect = 1.5
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 286 RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAEDLSTVEVPE 456
+G+Q++ YYI YH+W P+ ++ VV ++ ++ E+G E+ +PE
Sbjct: 344 KGQQWIWLQTHYYIT--YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEE----SLPE 397
Query: 457 ELRERFNKTNSDFMMN 504
++ + SD +N
Sbjct: 398 TAADKSQDSGSDNRIN 413
>BC126159-1|AAI26160.1| 846|Homo sapiens clock homolog (mouse)
protein.
Length = 846
Score = 31.9 bits (69), Expect = 1.5
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 286 RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAEDLSTVEVPE 456
+G+Q++ YYI YH+W P+ ++ VV ++ ++ E+G E+ +PE
Sbjct: 344 KGQQWIWLQTHYYIT--YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEE----SLPE 397
Query: 457 ELRERFNKTNSDFMMN 504
++ + SD +N
Sbjct: 398 TAADKSQDSGSDNRIN 413
>BC126157-1|AAI26158.1| 846|Homo sapiens clock homolog (mouse)
protein.
Length = 846
Score = 31.9 bits (69), Expect = 1.5
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 286 RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAEDLSTVEVPE 456
+G+Q++ YYI YH+W P+ ++ VV ++ ++ E+G E+ +PE
Sbjct: 344 KGQQWIWLQTHYYIT--YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEE----SLPE 397
Query: 457 ELRERFNKTNSDFMMN 504
++ + SD +N
Sbjct: 398 TAADKSQDSGSDNRIN 413
>BC041878-1|AAH41878.1| 846|Homo sapiens CLOCK protein protein.
Length = 846
Score = 31.9 bits (69), Expect = 1.5
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 286 RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAEDLSTVEVPE 456
+G+Q++ YYI YH+W P+ ++ VV ++ ++ E+G E+ +PE
Sbjct: 344 KGQQWIWLQTHYYIT--YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEE----SLPE 397
Query: 457 ELRERFNKTNSDFMMN 504
++ + SD +N
Sbjct: 398 TAADKSQDSGSDNRIN 413
>AK223549-1|BAD97269.1| 846|Homo sapiens clock variant protein.
Length = 846
Score = 31.9 bits (69), Expect = 1.5
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 286 RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAEDLSTVEVPE 456
+G+Q++ YYI YH+W P+ ++ VV ++ ++ E+G E+ +PE
Sbjct: 344 KGQQWIWLQTHYYIT--YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEE----SLPE 397
Query: 457 ELRERFNKTNSDFMMN 504
++ + SD +N
Sbjct: 398 TAADKSQDSGSDNRIN 413
>AF097458-1|AAF13733.1| 845|Homo sapiens clock protein.
Length = 845
Score = 31.9 bits (69), Expect = 1.5
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 286 RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAEDLSTVEVPE 456
+G+Q++ YYI YH+W P+ ++ VV ++ ++ E+G E+ +PE
Sbjct: 344 KGQQWIWLQTHYYIT--YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEE----SLPE 397
Query: 457 ELRERFNKTNSDFMMN 504
++ + SD +N
Sbjct: 398 TAADKSQDSGSDNRIN 413
>AF011568-1|AAB83969.1| 846|Homo sapiens CLOCK protein.
Length = 846
Score = 31.9 bits (69), Expect = 1.5
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 286 RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAEDLSTVEVPE 456
+G+Q++ YYI YH+W P+ ++ VV ++ ++ E+G E+ +PE
Sbjct: 344 KGQQWIWLQTHYYIT--YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEE----SLPE 397
Query: 457 ELRERFNKTNSDFMMN 504
++ + SD +N
Sbjct: 398 TAADKSQDSGSDNRIN 413
>AB002332-1|BAA20792.2| 848|Homo sapiens KIAA0334 protein.
Length = 848
Score = 31.9 bits (69), Expect = 1.5
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +1
Query: 286 RGRQYLRENGVYYIMREYHKWEKDPKALIACENVV---DILIQKEDEVGAEDLSTVEVPE 456
+G+Q++ YYI YH+W P+ ++ VV ++ ++ E+G E+ +PE
Sbjct: 346 KGQQWIWLQTHYYIT--YHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEE----SLPE 399
Query: 457 ELRERFNKTNSDFMMN 504
++ + SD +N
Sbjct: 400 TAADKSQDSGSDNRIN 415
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,754,095
Number of Sequences: 237096
Number of extensions: 1719201
Number of successful extensions: 4052
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4052
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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