Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0172
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024818-1|AAK29945.2|  375|Caenorhabditis elegans Hypothetical ...    75   4e-14
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q...    32   0.31 
AL021487-8|CAB76733.1|  320|Caenorhabditis elegans Hypothetical ...    30   0.95 
Z81062-13|CAB82210.1|  333|Caenorhabditis elegans Hypothetical p...    29   2.2  
AF016669-3|AAB66097.1|  275|Caenorhabditis elegans Hypothetical ...    29   2.2  
U41014-4|AAK32946.3|  557|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC006617-1|AAF39770.2|  397|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ...    27   6.7  
AL132860-29|CAB60505.2|  386|Caenorhabditis elegans Hypothetical...    27   8.9  
AC006663-5|AAY43999.1|  490|Caenorhabditis elegans Hypothetical ...    27   8.9  

>AC024818-1|AAK29945.2|  375|Caenorhabditis elegans Hypothetical
           protein Y54H5A.2 protein.
          Length = 375

 Score = 74.5 bits (175), Expect = 4e-14
 Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 13/147 (8%)
 Frame = +1

Query: 43  AIGTIRNISFDTDYHEFLVSPDLDLLTYILYPLMG-NEDYPDDEMETLPVTLQYLPKEKR 219
           A   +RN++FD   H  L+    + L  IL PLM  N++  ++E+  LPV LQY  KE R
Sbjct: 216 AADVLRNLAFDDSLHGSLLDTSDEYLCSILAPLMDVNDNLDEEEIAKLPVRLQYYEKE-R 274

Query: 220 REPDIDIRILILETLNKLCAQRRGRQYLRENGVYYIMREYHKW-----EKDPKALIACEN 384
              DI +R  ++E L +LCA + GR+ LR  GVY  MRE  K      +K  K L++ + 
Sbjct: 275 DSSDI-VRQKLIEALFQLCATKHGREVLRAKGVYPAMRELDKGTETAEDKHKKTLLSSQQ 333

Query: 385 ------VVDILIQKEDEVGAE-DLSTV 444
                 ++ ILI+ E E+  + +LS++
Sbjct: 334 EHTLHALIGILIRYESEMDVDPELSSI 360


>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 85
           protein.
          Length = 2203

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 21/83 (25%), Positives = 43/83 (51%)
 Frame = +1

Query: 223 EPDIDIRILILETLNKLCAQRRGRQYLRENGVYYIMREYHKWEKDPKALIACENVVDILI 402
           +PD+ I + ILE L +  A+ R    L+  G   +++     +++ +  I+ +N   +L+
Sbjct: 737 DPDLRIELYILEELRRGSARLRENHALQAVGADKLLKLVAMLDRNIRDAISADN-QRLLV 795

Query: 403 QKEDEVGAEDLSTVEVPEELRER 471
             +D+V   D+   E+ EE  +R
Sbjct: 796 PCDDDVDVGDVLEKEICEERVKR 818


>AL021487-8|CAB76733.1|  320|Caenorhabditis elegans Hypothetical
           protein Y45F10B.14 protein.
          Length = 320

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = -3

Query: 492 ITIGFIESFPQFLRYFYC*QVLRTDLVFLLNQYIHYILTRYQSFRV-FFPFMIFSHYIVH 316
           I + F +    FL +F   +++ T   F +  YI     +Y  +RV FF   + +H+IVH
Sbjct: 45  INLAFTDCCSAFLNFFVQQRMIPT--AFTIG-YISNGFCKYFGYRVCFFSHNLMAHFIVH 101

Query: 315 SVLA*ILS 292
           S  + +LS
Sbjct: 102 SNYSLVLS 109


>Z81062-13|CAB82210.1|  333|Caenorhabditis elegans Hypothetical
           protein F15A4.13 protein.
          Length = 333

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 11/38 (28%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -2

Query: 328 LYSTLRSRVNTVCLYVEHTI-CSVSPVSEYVCLYQALS 218
           +YST  ++  T+ +  + TI   +SP+++++CL++ L+
Sbjct: 42  MYSTTSNKQKTIRIEFDDTIQFDLSPITKHICLFELLA 79


>AF016669-3|AAB66097.1|  275|Caenorhabditis elegans Hypothetical
           protein K10G6.2 protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -3

Query: 153 FVAH*GIQNVCKQIQVRAH*ELVVVCVE*YITYCTDRTTLPYVGHI 16
           FV H   ++ C+   +  + E V +  E Y TYC+DR   P + HI
Sbjct: 61  FVNH--YRHYCRSSNIATYNEEVRIICERYRTYCSDR-VYPSINHI 103


>U41014-4|AAK32946.3|  557|Caenorhabditis elegans Hypothetical
           protein C06G1.5 protein.
          Length = 557

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 28  IRKGGAIGTIRNISFDTDYHEFL 96
           +RKGG +  IRN+ FD D ++ L
Sbjct: 298 LRKGGVLQAIRNLQFDDDINKSL 320


>AC006617-1|AAF39770.2|  397|Caenorhabditis elegans Hypothetical
           protein C39B5.6 protein.
          Length = 397

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 328 MREYHKWEKDPKALIACENVVDILIQKEDEVGAEDLSTVEVPEE 459
           ++ + KW K+ +  + CE   D  + +ED VG +  S V + EE
Sbjct: 196 LKIHGKWLKEVEEELKCEGKADFEVLRED-VGFDARSAVHIAEE 238


>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical protein
            Y48E1A.1a protein.
          Length = 1737

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 388  VDILIQKEDEVGAEDLSTVEVPEELRERF 474
            +DIL  ++ E+GA  L   ++ EE+ +RF
Sbjct: 1341 IDILAAEKRELGARHLKRSQIMEEIEKRF 1369


>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical protein
            Y48E1A.1a protein.
          Length = 1737

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 388  VDILIQKEDEVGAEDLSTVEVPEELRERF 474
            +DIL  ++ E+GA  L   ++ EE+ +RF
Sbjct: 1341 IDILAAEKRELGARHLKRSQIMEEIEKRF 1369


>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
            protein Y48E1A.1a protein.
          Length = 1737

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 388  VDILIQKEDEVGAEDLSTVEVPEELRERF 474
            +DIL  ++ E+GA  L   ++ EE+ +RF
Sbjct: 1341 IDILAAEKRELGARHLKRSQIMEEIEKRF 1369


>AL132860-29|CAB60505.2|  386|Caenorhabditis elegans Hypothetical
           protein Y56A3A.28 protein.
          Length = 386

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 8/20 (40%), Positives = 16/20 (80%)
 Frame = +1

Query: 157 YPDDEMETLPVTLQYLPKEK 216
           +P+D++E++P T++Y   EK
Sbjct: 309 HPEDQVESIPTTMKYTVNEK 328


>AC006663-5|AAY43999.1|  490|Caenorhabditis elegans Hypothetical
           protein H24K24.2 protein.
          Length = 490

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 19/74 (25%), Positives = 35/74 (47%)
 Frame = -2

Query: 424 HRPRLPSESVYPLHSHTLSKLSGLFPIYDILSLYSTLRSRVNTVCLYVEHTICSVSPVSE 245
           HR    S S   LH  +L KL  +    ++ +  STL + +  +   + H +  + PV+ 
Sbjct: 288 HRQLNASRSTENLHYSSLLKL--VIQTMNMFTSRSTLINGLQCLIWIINHKMDQIGPVNM 345

Query: 244 YVCLYQALSASPLV 203
           +  L + LS + L+
Sbjct: 346 FFTLKKLLSLADLL 359


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,381,985
Number of Sequences: 27780
Number of extensions: 272104
Number of successful extensions: 762
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)