Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0172
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    24   0.88 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   2.0  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   6.2  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   6.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.2  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   8.2  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 237 HTYSDTGDTEQIVC 278
           HTYS+TG +  +VC
Sbjct: 184 HTYSETGPSHCVVC 197


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 276 TQFVQCLQYQNTYVYI 229
           T  VQ   Y NT+VYI
Sbjct: 187 TPIVQSFDYNNTWVYI 202


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 525 INNSLLQIHHKITIGFIESFPQFLRYF 445
           +N +    + ++ +G ++   QFLRYF
Sbjct: 89  LNFAFKDKYKQVFLGGVDKNTQFLRYF 115


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 525 INNSLLQIHHKITIGFIESFPQFLRYF 445
           +N +    + ++ +G ++   QFLRYF
Sbjct: 89  LNFAFKDKYKQVFLGGVDKNTQFLRYF 115


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 394 YPLHSHTLSKLS 359
           +P  SHT+SKLS
Sbjct: 158 HPFISHTMSKLS 169


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 168 VIRIIFVAH*GIQNVC 121
           V RI+F A  G+ N+C
Sbjct: 471 VARIVFPASFGLLNIC 486


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,675
Number of Sequences: 438
Number of extensions: 3518
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)