Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0171
         (682 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0591 + 26472390-26472578,26472666-26472865,26472969-264730...   133   1e-31
10_08_0514 + 18465474-18465760,18465888-18465978,18466670-184667...   130   8e-31
11_03_0207 + 11675204-11676542,11676829-11676962,11677171-116774...    33   0.28 
06_01_0651 + 4711369-4712431,4713069-4713763                           29   3.4  
02_01_0326 - 2230617-2230735,2231430-2231493,2231646-2231849,223...    28   7.9  

>04_04_0591 +
           26472390-26472578,26472666-26472865,26472969-26473080,
           26475517-26475633,26475752-26476063,26476172-26476510
          Length = 422

 Score =  133 bits (321), Expect = 1e-31
 Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 4/158 (2%)
 Frame = +1

Query: 1   LDWLLSQQFPSGNFPSSLNSSNGDKLVQWCHGAPGFVPLCILAYQVFEDEKYLKIALHCG 180
           L +++  +FPSGN+P +    + D+ V WCHGAPG       A QVF +E++L+      
Sbjct: 267 LRYMIQNRFPSGNYPVTEEDKH-DRFVHWCHGAPGISLTLAKASQVFPEERFLEAIAEAA 325

Query: 181 EVIWQRGLCTKGYSLCHGVSGNAYAFIQLFQATKKALHLYRA---CCFMEWCALERPGTE 351
           EV+W RGL  K   +CHGVSGNAY F+ LF+ TKK  HLYRA    CF+   A +     
Sbjct: 326 EVVWNRGL-LKRVGICHGVSGNAYTFLALFRLTKKKEHLYRAKAFACFLLDRAKQLIADG 384

Query: 352 -LHRPDRPISLFEGVIGRLYLVEELAHAMDARFPALSI 462
            +H  D P SLFEG +G  YL  ++ + +D+RFP   +
Sbjct: 385 IMHSGDEPYSLFEGQVGMAYLFLDMINPLDSRFPGYEL 422


>10_08_0514 + 18465474-18465760,18465888-18465978,18466670-18466767,
            18466852-18466949,18468192-18468321,18468410-18468597,
            18470291-18470323,18470627-18471000,18471116-18471294,
            18471421-18471532,18471655-18471771,18471875-18472189,
            18472405-18472743
          Length = 786

 Score =  130 bits (315), Expect = 8e-31
 Identities = 64/156 (41%), Positives = 89/156 (57%), Gaps = 4/156 (2%)
 Frame = +1

Query: 7    WLLSQQFPSGNFPSSLNSSNGDKLVQWCHGAPGFVPLCILAYQVFEDEKYLKIALHCGEV 186
            +++  ++P+GN+PSS   S  D+LV WCHGAPG       AYQVF DE + + A    EV
Sbjct: 633  YMIRNRYPTGNYPSS-EGSESDRLVHWCHGAPGVALTLAKAYQVFHDEHFKQTAAEAAEV 691

Query: 187  IWQRGLCTKGYSLCHGVSGNAYAFIQLFQATKKALHLYR----ACCFMEWCALERPGTEL 354
            +W RGL  K   +CHGVSGNAY F+ L++ T    +LYR    AC  +E          +
Sbjct: 692  VWNRGL-LKRVGICHGVSGNAYVFLSLYRLTGNVEYLYRAKAFACFLLEKADQLIADGAM 750

Query: 355  HRPDRPISLFEGVIGRLYLVEELAHAMDARFPALSI 462
            H  D P SLFEG  G  YL+ ++    +++FPA  +
Sbjct: 751  HGGDHPFSLFEGRAGMAYLLLDMVSPSESKFPAYEL 786


>11_03_0207 +
           11675204-11676542,11676829-11676962,11677171-11677411,
           11677508-11677719,11677837-11677883,11677988-11678090,
           11678594-11678830
          Length = 770

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 7   WLLSQQFPSGNFPSSLNSSNGDKLVQWC 90
           +L+ +  PSG FPS L+ S+ +K + WC
Sbjct: 555 FLVYEYVPSGTFPSYLSGSSPEKTLNWC 582


>06_01_0651 + 4711369-4712431,4713069-4713763
          Length = 585

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = -1

Query: 511 CILVSSPFLR*SPVSTRLIMLETWRP*HEQVLPPNINGQLHLRKERWV 368
           C +V+SP L  S VSTR  +   WRP    V+  +  G L + +  WV
Sbjct: 469 CTVVASPELLASGVSTRTFLGRPWRPYARAVVMDSYLGPL-VDRAGWV 515


>02_01_0326 -
           2230617-2230735,2231430-2231493,2231646-2231849,
           2231945-2232016,2232293-2232458,2232543-2232758,
           2232873-2232949,2233056-2233151,2233237-2233280,
           2233435-2233522,2233805-2233886,2233961-2234091,
           2234264-2234350,2234804-2234887,2234985-2235144,
           2235251-2235414,2235757-2235762,2235823-2235879,
           2236159-2236278,2236387-2236496,2236587-2236689,
           2236789-2236842,2237106-2237168,2237258-2237325,
           2237412-2237469,2237684-2237750,2238233-2238309,
           2238433-2238516,2238652-2238828,2239010-2239144
          Length = 1010

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 23  SFRVEIFRRL*TVATETSWSSGVMGLLVSCRYAY 124
           +FRVE F+ L T A      S +  L+  C Y+Y
Sbjct: 854 NFRVEAFKALLTAAKTVEQLSALGELMYQCHYSY 887


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,264,588
Number of Sequences: 37544
Number of extensions: 385599
Number of successful extensions: 936
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)