Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0171
         (682 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_53812| Best HMM Match : LANC_like (HMM E-Value=4.9e-17)             84   1e-16
SB_9719| Best HMM Match : LANC_like (HMM E-Value=7.5e-09)              46   2e-05
SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_51089| Best HMM Match : I-set (HMM E-Value=1.4e-38)                 29   4.6  
SB_51401| Best HMM Match : PseudoU_synth_1 (HMM E-Value=2e-28)         28   6.1  
SB_26975| Best HMM Match : ASC (HMM E-Value=5.5e-31)                   28   6.1  

>SB_53812| Best HMM Match : LANC_like (HMM E-Value=4.9e-17)
          Length = 283

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 35/58 (60%), Positives = 44/58 (75%)
 Frame = +1

Query: 133 QVFEDEKYLKIALHCGEVIWQRGLCTKGYSLCHGVSGNAYAFIQLFQATKKALHLYRA 306
           QVF  EKYL  A  CGEVIW+RGL  KGY +CHGV+GN YA + L++AT ++ +LYRA
Sbjct: 191 QVFGKEKYLNAAQRCGEVIWRRGLLKKGYGICHGVAGNGYALLALYKATNESKYLYRA 248


>SB_9719| Best HMM Match : LANC_like (HMM E-Value=7.5e-09)
          Length = 171

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 24/74 (32%), Positives = 35/74 (47%)
 Frame = +1

Query: 241 GNAYAFIQLFQATKKALHLYRACCFMEWCALERPGTELHRPDRPISLFEGVIGRLYLVEE 420
           GN Y F+ L++ T+   +LYR+  F ++            PD P SLFEG+ G L    +
Sbjct: 96  GNGYVFLLLYRLTRDPKYLYRSYQFSDFMQTAEFTQGARTPDCPYSLFEGLAGTLCFYAD 155

Query: 421 LAHAMDARFPALSI 462
           L     A FP   +
Sbjct: 156 LMRPDKASFPFFDV 169


>SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 864

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -1

Query: 574 TSRMIFIYYYNLQFTASLRLGCILVSSPFLR*SPVSTRLIMLETWRP-*HEQVLPPNING 398
           ++R + +Y + L + + L L C L    FLR   +   +I+ +  +   H +VLP NI  
Sbjct: 403 SNRKLALYVFALIYKSVLSLNCRLEEEEFLRQQRIRDDMILRQQQQNLQHHRVLPRNIPS 462

Query: 397 Q 395
           Q
Sbjct: 463 Q 463


>SB_51089| Best HMM Match : I-set (HMM E-Value=1.4e-38)
          Length = 1334

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 186  YMATWTLYKRLQSLSWSQWKCLR 254
            Y   W+ Y R   LS+ +W CLR
Sbjct: 1042 YGKLWSRYLRFHPLSYEEWPCLR 1064


>SB_51401| Best HMM Match : PseudoU_synth_1 (HMM E-Value=2e-28)
          Length = 503

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 128 ANMHNGTKPGAP*HHWTNLSPLLLFKDDGKFP 33
           A++ +   PG P  +W++  P+LL++  G  P
Sbjct: 393 ASLDSAEIPGNPLTNWSSFKPMLLYQSSGLVP 424


>SB_26975| Best HMM Match : ASC (HMM E-Value=5.5e-31)
          Length = 498

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -1

Query: 121 CITARNQEPHDTTGPTCLRCYCSKTTENFHSETVDSTTNP 2
           CI   N+   D+ G +CL     +  EN +  T+ S   P
Sbjct: 341 CIVKANETAEDSDGKSCLTKCAIRCDENIYKLTISSAVFP 380


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,698,273
Number of Sequences: 59808
Number of extensions: 462275
Number of successful extensions: 1117
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)