Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0171
         (682 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   0.51 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    25   0.51 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.51 
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    25   0.88 
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    25   0.88 
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    24   1.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   1.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   1.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   1.5  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    24   1.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.7  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    22   6.2  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +2

Query: 413 WKNL--LMLWTPGFQHYQSSRY 472
           W+ L  ++ WTP FQ Y+  RY
Sbjct: 219 WRKLRNIVHWTPFFQTYKKQRY 240


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +2

Query: 413 WKNL--LMLWTPGFQHYQSSRY 472
           W+ L  ++ WTP FQ Y+  RY
Sbjct: 134 WRKLRNIVHWTPFFQTYKKQRY 155


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.51
 Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
 Frame = +2

Query: 413 WKNL--LMLWTPGFQHYQSSRY 472
           W+ L  ++ WTP FQ Y+  RY
Sbjct: 453 WRKLRNIVHWTPFFQTYKKQRY 474


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 175 CGEVIWQRGLCTKGYSLCHGV 237
           CG   + RGL +  Y +C+G+
Sbjct: 202 CGTDYFNRGLLSASYLVCYGI 222


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 175 CGEVIWQRGLCTKGYSLCHGV 237
           CG   + RGL +  Y +C+G+
Sbjct: 78  CGTDYFNRGLLSASYLVCYGI 98


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 109 VPLCILAYQVFEDEKY 156
           VP+C L  +VF ++KY
Sbjct: 9   VPVCFLLGEVFSEDKY 24


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 55  NSSNGDKLVQWCHGAPGFVPLC 120
           NS   DK+++WC  + G +  C
Sbjct: 378 NSGATDKIIRWCTWSEGDLEKC 399


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 55  NSSNGDKLVQWCHGAPGFVPLC 120
           NS   DK+++WC  + G +  C
Sbjct: 378 NSGATDKIIRWCTWSEGDLEKC 399


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 55  NSSNGDKLVQWCHGAPGFVPLC 120
           NS   DK+++WC  + G +  C
Sbjct: 378 NSGATDKIIRWCTWSEGDLEKC 399


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 109 VPLCILAYQVFEDEKY 156
           VP+C L  +VF ++KY
Sbjct: 9   VPVCFLLGEVFSEDKY 24


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 322 WCALERPGTELHRPDR 369
           W  +E PGT    PDR
Sbjct: 645 WMIIEPPGTRFFYPDR 660


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 486 KNGDDTKIQPSLKEAV 533
           KNGD TKI P +  A+
Sbjct: 28  KNGDYTKIMPDILTAI 43


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 322 WCALERPGTELHRPDR 369
           W  +E PGT    PDR
Sbjct: 735 WMIIEPPGTRFFYPDR 750


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 437 TPGFQHYQSSRYWRLT*KWRR 499
           T  F  +QS RY +L   WR+
Sbjct: 16  TKKFIRHQSDRYSKLKRNWRK 36


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,934
Number of Sequences: 438
Number of extensions: 4686
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)