Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0170
(717 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2058| Best HMM Match : Lactamase_B (HMM E-Value=1.7e-16) 133 2e-31
SB_37595| Best HMM Match : Ribosomal_S11 (HMM E-Value=0) 32 0.53
SB_50939| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_9232| Best HMM Match : Coq4 (HMM E-Value=1.8) 31 0.93
SB_52091| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_51718| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_30227| Best HMM Match : Lactamase_B (HMM E-Value=1.1e-17) 30 2.2
SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25) 29 2.8
SB_26965| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_3662| Best HMM Match : Cu-oxidase_3 (HMM E-Value=2.5) 29 3.8
SB_28014| Best HMM Match : HOOK (HMM E-Value=1.8e-13) 29 5.0
SB_8287| Best HMM Match : UVR (HMM E-Value=0.07) 29 5.0
SB_48013| Best HMM Match : Keratin_B2 (HMM E-Value=0.0058) 28 6.6
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_14616| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_6308| Best HMM Match : CDC73 (HMM E-Value=5) 28 8.7
>SB_2058| Best HMM Match : Lactamase_B (HMM E-Value=1.7e-16)
Length = 338
Score = 133 bits (321), Expect = 2e-31
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = +1
Query: 451 AGGNEDLIKERPGLIVYGGDDRIGALTKKVEHNTKFKIGNLNVQCLFTPCHTTGHICYFV 630
AGGNE L+K GL VYGGD+RIGAL+KKV H+ +FK+G+L+V+CLFTPCHT+GHIC+ V
Sbjct: 178 AGGNEGLVKLVSGLTVYGGDERIGALSKKVSHDEEFKVGSLHVKCLFTPCHTSGHICFHV 237
Query: 631 TAPEEGNDSVVFTGDTLFLGGCGRFF 708
T + G + VFTGDTLF GGCGRFF
Sbjct: 238 TG-DAGKPTAVFTGDTLFSGGCGRFF 262
Score = 74.1 bits (174), Expect = 1e-13
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = +1
Query: 238 AHSSQEDHQYKNMDVKILPALQDNYMYLIVDKATKEAAIVDPVEPKTVLKAVEEQGVNL 414
AHS + +M +++LPAL DNYMYL+VD TKEAA+VDPVEP+ V+ A +E+GV L
Sbjct: 65 AHSKEVTMVQDDMKIRLLPALSDNYMYLLVDPKTKEAAVVDPVEPEKVVTAFQEEGVRL 123
>SB_37595| Best HMM Match : Ribosomal_S11 (HMM E-Value=0)
Length = 543
Score = 31.9 bits (69), Expect = 0.53
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 538 VEHNTKFKIGNLNVQCLFTPCHTTGHICYFVTAPEEGNDSVVFTGDTLFLGGCGR 702
V K G+ +++ L TP HT G I FV+ + + FTGD L + CGR
Sbjct: 415 VNDGDKVVFGDESLEVLATPGHTNGCIT-FVSHMHK----MAFTGDALLIRACGR 464
>SB_50939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2337
Score = 31.5 bits (68), Expect = 0.71
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 127 FKKTYSMLARFVNSLPSGLSQRITKLYFRALIRNQREAHSSQEDHQYKNMDVKILPALQD 306
F+++ S + FV S + + K Y R R + + +E Q D++ L + D
Sbjct: 978 FQRSASCPSEFVAS--ESTTYTLHKPYRRCYPRQRVVVNGMEEQWQADLCDMQALRSYND 1035
Query: 307 NYMYL--IVDKATKEAAIVDPVEPKTVLKAVE 396
Y YL ++D +K A +V P++ KT + VE
Sbjct: 1036 GYNYLLIVIDLLSKYAWVV-PLKDKTGKRLVE 1066
>SB_9232| Best HMM Match : Coq4 (HMM E-Value=1.8)
Length = 1392
Score = 31.1 bits (67), Expect = 0.93
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 115 NFILFKKTY-SMLARFVNSLPSGLSQRITKLYFRALIRNQREAHSS 249
N+I+ KKT+ SM+ + + S + + YF+AL+ + AH +
Sbjct: 788 NYIVLKKTFLSMMVKITKADDSNIDNNQSLAYFQALLNFSKSAHET 833
>SB_52091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1775
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 136 TYSMLARFVNSLPSGLSQRITKLYFRALIRNQREAHSSQEDHQYKNMDVKILPALQDNYM 315
T+ A+ + L S + K Y R R + + E Q D++ L + D Y
Sbjct: 945 TFQRSAKVNSWLRSQFIYTLHKPYRRRYPRQRVVVNGMDEQWQADMCDMQALRSYNDGYN 1004
Query: 316 YL--IVDKATKEAAIVDPVEPKTVLKAVE 396
YL ++D +K A +V P++ KT + VE
Sbjct: 1005 YLLTVIDVLSKYAWVV-PLKDKTGKRLVE 1032
>SB_51718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1602
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 151 ARFVNSLPSGLSQRITKLYFRALIRNQREAHSSQEDHQYKNMDVKILPALQDNYMYL--I 324
A+ + L S S + K Y R R + + E Q D++ L + D Y YL +
Sbjct: 77 AQVASWLRSQPSYTLHKPYRRRYPRQRVVVNGMDEQWQADLCDMQALRSYNDGYNYLLTV 136
Query: 325 VDKATKEAAIVDPVEPKTVLKAVE 396
+D +K A +V P++ KT + VE
Sbjct: 137 IDVLSKYAWVV-PLKDKTGKRLVE 159
>SB_30227| Best HMM Match : Lactamase_B (HMM E-Value=1.1e-17)
Length = 313
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 529 TKKVEHNTKFKIGNLNVQCLFTPCHTTGHICYFVTAPEEGNDSVVFTGDTLFLG 690
T+ ++ F +GN ++ L P HT G I + EE S ++TGD ++ G
Sbjct: 139 TRVLDDGDVFDLGNRKIRVLHLPGHTKGSIALY----EEDTKS-LWTGDIIYQG 187
>SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25)
Length = 1962
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +1
Query: 160 VNS-LPSGLSQRITKLYFRALIRNQREAHSSQEDHQYKNMDVKILPALQDNYMYL--IVD 330
VNS L S + + K Y R R + + E Q D++ L + D Y YL ++D
Sbjct: 603 VNSWLRSQSTYTLHKPYRRRYPRQRVVVNGMDEQWQADLCDMQALRSYNDGYNYLLTVID 662
Query: 331 KATKEAAIVDPVEPKTVLKAVE 396
+K A +V P++ KT + VE
Sbjct: 663 VLSKYAWVV-PLKDKTGKRIVE 683
>SB_26965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 827
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 151 ARFVNSLPSGLSQRITKLYFRALIRNQREAHSSQEDHQYKNMDVKILPALQDNYMYL--I 324
A+ + L S + + K Y R R + + E Q D++ L + D Y YL +
Sbjct: 724 AQVTSWLRSQSTYTLHKPYRRRYPRQRVVVNGMDEQWQADLCDMQALRSYNDGYNYLLTV 783
Query: 325 VDKATKEAAIVDPVEPKTVLKAVE 396
+D +K A +V P++ KT + VE
Sbjct: 784 IDVLSKYAWVV-PLKDKTGKRLVE 806
>SB_3662| Best HMM Match : Cu-oxidase_3 (HMM E-Value=2.5)
Length = 265
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +1
Query: 529 TKKVEHNTKFKIGNLNVQCLFTPCHTTGHICYFVTAPEEGNDSVVFTGDTLFL 687
T +V +T++ + N H TGH Y + + G+ V TG T ++
Sbjct: 150 TIRVTRSTQYGVHNTGYTKYTIRVHNTGHTKYIIRGTQYGSHEVHNTGHTKYI 202
>SB_28014| Best HMM Match : HOOK (HMM E-Value=1.8e-13)
Length = 725
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 181 LSQRITKLYFRAL-IRNQREAHSSQEDHQYKNMDVKILPALQDNYMYLIVDKATKEAAIV 357
L+QRI ++ +RNQ++AH+S +D + +D+K L + + ++ K+ A +
Sbjct: 660 LNQRIMEMESEVDDLRNQQKAHASDQDSE---LDIKYKDHL--DKLKEANEQLQKKKAYI 714
Query: 358 DPVEPK 375
D +EPK
Sbjct: 715 DSLEPK 720
>SB_8287| Best HMM Match : UVR (HMM E-Value=0.07)
Length = 187
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 181 LSQRITKLYFRAL-IRNQREAHSSQEDHQYKNMDVKILPALQDNYMYLIVDKATKEAAIV 357
L+QRI ++ +RNQ++AH+S +D + +D+K L + + ++ K+ A +
Sbjct: 3 LNQRIMEMESEVDDLRNQQKAHASDQDSE---LDIKYKDHL--DKLKEANEQLQKKKAYI 57
Query: 358 DPVEPK 375
D +EPK
Sbjct: 58 DSLEPK 63
>SB_48013| Best HMM Match : Keratin_B2 (HMM E-Value=0.0058)
Length = 445
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 289 GFLHPCFYTGGPLGNCELPFDC 224
G+LH C TGG L C+L C
Sbjct: 260 GYLHECQSTGGYLHECQLQATC 281
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 325 VDKATKEAAIVDPVEPKTVLKAVEE 399
+DK+ AIVDP + K+V K VEE
Sbjct: 942 LDKSIDMGAIVDPSQQKSVAKMVEE 966
>SB_14616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1307
Score = 27.9 bits (59), Expect = 8.7
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +1
Query: 160 VNS-LPSGLSQRITKLYFRALIRNQREAHSSQEDHQYKNMDVKILPALQDNYMYL--IVD 330
VNS L S + + K Y R R + + E Q D++ L + D Y YL ++D
Sbjct: 561 VNSWLRSQPTYTLHKPYRRRYPRQRMVVNGMDEQWQADLCDMQALRSYNDGYNYLLTVID 620
Query: 331 KATKEAAIVDPVEPKTVLKAVE 396
+ A +V P++ KT + VE
Sbjct: 621 VLSNYAWVV-PLKDKTGKRLVE 641
>SB_6308| Best HMM Match : CDC73 (HMM E-Value=5)
Length = 388
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 276 GCKNPASTPGQLHVLDCRQGNKGS 347
G P S GQ +++ RQGNKGS
Sbjct: 286 GAAAPGSRKGQTYLMAQRQGNKGS 309
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,025,600
Number of Sequences: 59808
Number of extensions: 388852
Number of successful extensions: 931
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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