Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0168
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC039600-1|AAH39600.1| 1049|Homo sapiens hect domain and RLD 4 p... 35 0.22
AY650033-1|AAV66579.1| 979|Homo sapiens HECT and RCC1 containin... 35 0.22
AY221963-1|AAO65480.1| 1057|Homo sapiens HECT and RCC1 containin... 35 0.22
AL356741-3|CAH74148.1| 1049|Homo sapiens hect domain and RLD 4 p... 35 0.22
AL356741-1|CAH74146.1| 907|Homo sapiens hect domain and RLD 4 p... 35 0.22
AL133551-3|CAI16032.1| 1049|Homo sapiens hect domain and RLD 4 p... 35 0.22
AL133551-1|CAI16031.1| 907|Homo sapiens hect domain and RLD 4 p... 35 0.22
AB046813-1|BAB13419.1| 953|Homo sapiens KIAA1593 protein protein. 35 0.22
AL834382-1|CAD39045.1| 505|Homo sapiens hypothetical protein pr... 32 1.6
X96753-1|CAA65529.1| 2322|Homo sapiens melanoma-associated chond... 31 4.7
AY766461-1|AAX07296.1| 87|Homo sapiens CC chemokine ligand 4L2... 31 4.7
AY766450-1|AAX07309.1| 87|Homo sapiens CC chemokine ligand 4L2... 31 4.7
AY359468-1|AAQ62842.1| 2322|Homo sapiens melanoma chondroitin su... 31 4.7
BC104023-1|AAI04024.1| 403|Homo sapiens TSGA10IP protein protein. 30 8.3
BC104022-1|AAI04023.1| 556|Homo sapiens testis specific, 10 int... 30 8.3
AK057442-1|BAB71488.1| 556|Homo sapiens protein ( Homo sapiens ... 30 8.3
>BC039600-1|AAH39600.1| 1049|Homo sapiens hect domain and RLD 4
protein.
Length = 1049
Score = 35.1 bits (77), Expect = 0.22
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 155 SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 316
SY +GRFP + E SG + G F V RT VD A + FH +
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470
Query: 317 SDVPPEHPADSESVALAKDRH 379
+ P+HP S+ VA + +++
Sbjct: 471 --IQPDHPQISQQVAASLEKN 489
>AY650033-1|AAV66579.1| 979|Homo sapiens HECT and RCC1 containing
protein 4 isoform 3 protein.
Length = 979
Score = 35.1 bits (77), Expect = 0.22
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 155 SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 316
SY +GRFP + E SG + G F V RT VD A + FH +
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470
Query: 317 SDVPPEHPADSESVALAKDRH 379
+ P+HP S+ VA + +++
Sbjct: 471 --IQPDHPQISQQVAASLEKN 489
>AY221963-1|AAO65480.1| 1057|Homo sapiens HECT and RCC1 containing
protein 4 isoform 1 protein.
Length = 1057
Score = 35.1 bits (77), Expect = 0.22
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 155 SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 316
SY +GRFP + E SG + G F V RT VD A + FH +
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470
Query: 317 SDVPPEHPADSESVALAKDRH 379
+ P+HP S+ VA + +++
Sbjct: 471 --IQPDHPQISQQVAASLEKN 489
>AL356741-3|CAH74148.1| 1049|Homo sapiens hect domain and RLD 4
protein.
Length = 1049
Score = 35.1 bits (77), Expect = 0.22
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 155 SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 316
SY +GRFP + E SG + G F V RT VD A + FH +
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470
Query: 317 SDVPPEHPADSESVALAKDRH 379
+ P+HP S+ VA + +++
Sbjct: 471 --IQPDHPQISQQVAASLEKN 489
>AL356741-1|CAH74146.1| 907|Homo sapiens hect domain and RLD 4
protein.
Length = 907
Score = 35.1 bits (77), Expect = 0.22
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 155 SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 316
SY +GRFP + E SG + G F V RT VD A + FH +
Sbjct: 262 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 320
Query: 317 SDVPPEHPADSESVALAKDRH 379
+ P+HP S+ VA + +++
Sbjct: 321 --IQPDHPQISQQVAASLEKN 339
>AL133551-3|CAI16032.1| 1049|Homo sapiens hect domain and RLD 4
protein.
Length = 1049
Score = 35.1 bits (77), Expect = 0.22
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 155 SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 316
SY +GRFP + E SG + G F V RT VD A + FH +
Sbjct: 412 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 470
Query: 317 SDVPPEHPADSESVALAKDRH 379
+ P+HP S+ VA + +++
Sbjct: 471 --IQPDHPQISQQVAASLEKN 489
>AL133551-1|CAI16031.1| 907|Homo sapiens hect domain and RLD 4
protein.
Length = 907
Score = 35.1 bits (77), Expect = 0.22
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 155 SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 316
SY +GRFP + E SG + G F V RT VD A + FH +
Sbjct: 262 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 320
Query: 317 SDVPPEHPADSESVALAKDRH 379
+ P+HP S+ VA + +++
Sbjct: 321 --IQPDHPQISQQVAASLEKN 339
>AB046813-1|BAB13419.1| 953|Homo sapiens KIAA1593 protein protein.
Length = 953
Score = 35.1 bits (77), Expect = 0.22
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 155 SYTAGRFPGHVDREHTEVSDGSGVVRGKFAYVDPRHKVRT------VDYVADKEGFHPIL 316
SY +GRFP + E SG + G F V RT VD A + FH +
Sbjct: 308 SYPSGRFPVEIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKL- 366
Query: 317 SDVPPEHPADSESVALAKDRH 379
+ P+HP S+ VA + +++
Sbjct: 367 --IQPDHPQISQQVAASLEKN 385
>AL834382-1|CAD39045.1| 505|Homo sapiens hypothetical protein
protein.
Length = 505
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -2
Query: 411 CSSAILEYSWKCLSLAKATDSESAGCSGGTSLSIGW 304
C+S +L+ +W+C S T + SA CSG T + W
Sbjct: 332 CTSRMLKLTWRCASCRTFTPTFSA-CSGATVYAASW 366
>X96753-1|CAA65529.1| 2322|Homo sapiens melanoma-associated
chondroitin sulfate proteoglycan (MCSP) protein.
Length = 2322
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 104 SHLETTTPDPPPKPYVFSYTAGRFP--GHVDREHTEVSDGSG 223
+HLE T + P P F Y + P G++ + T +SDG G
Sbjct: 805 AHLEATLEEAGPSPPTFHYEVVQAPRKGNLQLQGTRLSDGQG 846
>AY766461-1|AAX07296.1| 87|Homo sapiens CC chemokine ligand 4L2
protein.
Length = 87
Score = 30.7 bits (66), Expect = 4.7
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +2
Query: 50 LCHTLILVLAAGLTSCDVSHLETTTPDPPPKPYVFSYTAGRFPGH--VDREHTEVSDGSG 223
LC T++ +L C ++ L PP FSYTA + P + VD T
Sbjct: 3 LCVTVLSLLVLVAAFCSLA-LSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQP 61
Query: 224 VVRGKFAYVDPRHKVRTVDYVADKE 298
V GK DP +YV D E
Sbjct: 62 AVVGKQVCADPSES-WVQEYVYDLE 85
>AY766450-1|AAX07309.1| 87|Homo sapiens CC chemokine ligand 4L2
protein.
Length = 87
Score = 30.7 bits (66), Expect = 4.7
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +2
Query: 50 LCHTLILVLAAGLTSCDVSHLETTTPDPPPKPYVFSYTAGRFPGH--VDREHTEVSDGSG 223
LC T++ +L C ++ L PP FSYTA + P + VD T
Sbjct: 3 LCVTVLSLLVLVAAFCSLA-LSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQP 61
Query: 224 VVRGKFAYVDPRHKVRTVDYVADKE 298
V GK DP +YV D E
Sbjct: 62 AVVGKQVCADPSES-WVQEYVYDLE 85
>AY359468-1|AAQ62842.1| 2322|Homo sapiens melanoma chondroitin
sulfate proteoglycan protein.
Length = 2322
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 104 SHLETTTPDPPPKPYVFSYTAGRFP--GHVDREHTEVSDGSG 223
+HLE T + P P F Y + P G++ + T +SDG G
Sbjct: 805 AHLEATLEEAGPSPPTFHYEVVQAPRKGNLQLQGTRLSDGQG 846
>BC104023-1|AAI04024.1| 403|Homo sapiens TSGA10IP protein protein.
Length = 403
Score = 29.9 bits (64), Expect = 8.3
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = -3
Query: 359 QRIQSQ-LGALEARRSVSDGSLPCQP-RSPLSEPCDVGRRTRIFLSXXXXXXXXXCVPCQ 186
+++Q Q LGA EA R +S G LP +P R +SE T CQ
Sbjct: 213 KQVQLQSLGAEEAERGLSSGVLPQRPRRGSISEEEQFSEATEEAEEGEHRTPCRRRAGCQ 272
Query: 185 RVRGIVQQYRRTRRASVEGQAWSS 114
R +G + + V+GQ+ S
Sbjct: 273 R-KGQISGEEASDEGEVQGQSQGS 295
>BC104022-1|AAI04023.1| 556|Homo sapiens testis specific, 10
interacting protein protein.
Length = 556
Score = 29.9 bits (64), Expect = 8.3
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = -3
Query: 359 QRIQSQ-LGALEARRSVSDGSLPCQP-RSPLSEPCDVGRRTRIFLSXXXXXXXXXCVPCQ 186
+++Q Q LGA EA R +S G LP +P R +SE T CQ
Sbjct: 213 KQVQLQSLGAEEAERGLSSGVLPQRPRRGSISEEEQFSEATEEAEEGEHRTPCRRRAGCQ 272
Query: 185 RVRGIVQQYRRTRRASVEGQAWSS 114
R +G + + V+GQ+ S
Sbjct: 273 R-KGQISGEEASDEGEVQGQSQGS 295
>AK057442-1|BAB71488.1| 556|Homo sapiens protein ( Homo sapiens
cDNA FLJ32880 fis, clone TESTI2004122. ).
Length = 556
Score = 29.9 bits (64), Expect = 8.3
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = -3
Query: 359 QRIQSQ-LGALEARRSVSDGSLPCQP-RSPLSEPCDVGRRTRIFLSXXXXXXXXXCVPCQ 186
+++Q Q LGA EA R +S G LP +P R +SE T CQ
Sbjct: 213 KQVQLQSLGAEEAERGLSSGVLPQRPRRGSISEEEQFSEATEEAEEGEHRTPCRRRAGCQ 272
Query: 185 RVRGIVQQYRRTRRASVEGQAWSS 114
R +G + + V+GQ+ S
Sbjct: 273 R-KGQISGEEASDEGEVQGQSQGS 295
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,305,373
Number of Sequences: 237096
Number of extensions: 1902177
Number of successful extensions: 10041
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10034
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -