Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0168
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022970-4|AAB69898.1|  336|Caenorhabditis elegans Hypothetical ...    33   0.23 
Z22179-1|CAA80169.1|  254|Caenorhabditis elegans Hypothetical pr...    31   0.71 
AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical...    30   1.2  
AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical...    29   3.8  
U23511-10|AAC46789.3|  260|Caenorhabditis elegans Hypothetical p...    28   5.0  
AF016430-10|AAB65374.1|  467|Caenorhabditis elegans Hypothetical...    28   6.7  
Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>AF022970-4|AAB69898.1|  336|Caenorhabditis elegans Hypothetical
           protein F13A2.3 protein.
          Length = 336

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +3

Query: 123 RLTLHRSPTCSPILLDDSPDTLTGNTPKSVTAAES*EENSRTSTHVTR 266
           R   H +  C PI  D++P T   NTP + T  E+ E+     ++ TR
Sbjct: 94  RAPRHINIKCEPISDDENPTTANSNTPTTPTTPENTEDPFEGPSYATR 141


>Z22179-1|CAA80169.1|  254|Caenorhabditis elegans Hypothetical
           protein F58A4.1 protein.
          Length = 254

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
 Frame = +3

Query: 93  VATCLTSRRP-RLTLHRSPTCSPILLDDSPDTLTGNTPKSVTAAES*EENSRTSTHVTRF 269
           ++T   S  P RLT     T +PI    SP T T +T  S + + S   ++ T T  TR 
Sbjct: 68  ISTSTVSTTPERLTKPYEETDTPIPTHSSPSTST-STSTSTSTSTSTSRSTSTVTPTTRS 126

Query: 270 GQWTTWLTRKASIRY*ATCLQSTQLTLNPLPWLKTGT 380
              TT  +   S     T   S Q+T   +P    GT
Sbjct: 127 STTTTATSTPTSSSKATT--TSAQITQPEIPQAAPGT 161


>AL110485-29|CAB60376.3|  732|Caenorhabditis elegans Hypothetical
           protein Y46G5A.10 protein.
          Length = 732

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +3

Query: 123 RLTLHRSPTCSPILLDDSPDTLTGNTPKSVTAAES*EENSRTSTHVT---RFGQWTTWLT 293
           +L   RS T     +  SP ++T N PK+ T+     EN +T  H T   RF   T+ L 
Sbjct: 301 KLRPSRSDTILSRSVSTSPSSVTDNIPKTSTSRIPSSENPKTMEHTTTSRRFPTQTSILR 360

Query: 294 RKASI 308
           ++  I
Sbjct: 361 KEHEI 365


>AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical
           protein W10G11.15 protein.
          Length = 211

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 420 CWACSSAILEYSWKCLSLAKATDSESAGCSGG 325
           C A S+A    +WK +  ++A +SE  GC  G
Sbjct: 12  CLALSAADCPAAWKAILNSQAEESEDNGCEAG 43


>U23511-10|AAC46789.3|  260|Caenorhabditis elegans Hypothetical
           protein C32D5.1 protein.
          Length = 260

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 126 LTLHRSPTCSPILLDDS-PDTLTGNTPKSVTAAES*EENSRTSTHVTRF 269
           +T  +S +C+ I L+ S P T +  TP S     + E+++    +VT F
Sbjct: 180 VTCQQSTSCTSIQLNSSAPSTCSAKTPNSTANLPTSEKHADIIAYVTNF 228


>AF016430-10|AAB65374.1|  467|Caenorhabditis elegans Hypothetical
           protein C05C8.7 protein.
          Length = 467

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +2

Query: 224 VVRGKFAYVDPRHKVRTVDYVADKEGFHPILSDVPPEH 337
           V RG   Y+ P+H +R        EG+     ++ P+H
Sbjct: 396 VKRGDIFYIPPKHNIRFSSCSEPLEGYRTFSYEMGPDH 433


>Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical
           protein F23H12.5 protein.
          Length = 802

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = +2

Query: 317 SDVPPEHPADSESVALA-KDRHFQLYSKIAEEHAQHPHPYETSVPRQSAAVAEATLKHSE 493
           +++P      +  +AL    ++FQ + K+  E    P PY  +VP  S      T K  +
Sbjct: 415 TEIPQPSYLQNPRIALVTSQQNFQHFPKLMNEQRASPGPYFRTVPSPSEYDEPTTTKKPK 474

Query: 494 LFRV 505
           +  V
Sbjct: 475 IVTV 478


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,931,347
Number of Sequences: 27780
Number of extensions: 285674
Number of successful extensions: 1104
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)