Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0166
         (567 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095508-1|AAM12243.1|  433|Drosophila melanogaster AT04280p pro...    29   3.3  
AE014297-259|AAF52020.2|  832|Drosophila melanogaster CG31550-PB...    29   3.3  
AF217400-1|AAF73385.1|  237|Drosophila melanogaster unknown prot...    28   7.7  

>AY095508-1|AAM12243.1|  433|Drosophila melanogaster AT04280p
           protein.
          Length = 433

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -1

Query: 492 VKRQ*LPQFKIEGSQKTGSLTFRNKITFLNNFKGIL 385
           +KRQ LPQ  +E        TF N  +FL NFK IL
Sbjct: 127 MKRQQLPQPSVEQPPPKVKNTFCNDGSFLENFKKIL 162


>AE014297-259|AAF52020.2|  832|Drosophila melanogaster CG31550-PB,
           isoform B protein.
          Length = 832

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -1

Query: 492 VKRQ*LPQFKIEGSQKTGSLTFRNKITFLNNFKGIL 385
           +KRQ LPQ  +E        TF N  +FL NFK IL
Sbjct: 127 MKRQQLPQPSVEQPPPKVKNTFCNDGSFLENFKKIL 162


>AF217400-1|AAF73385.1|  237|Drosophila melanogaster unknown
           protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/40 (27%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
 Frame = -2

Query: 194 FIVEVLYLTFCANKTNSSYFTPV---SMFLIYDVCWNTVF 84
           FI+ +L++  C N+++ S   P+   S+FL+  +C++ ++
Sbjct: 183 FIILLLFVRVCRNRSDDSANQPIRFGSLFLLLGLCFSFIY 222


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,299,962
Number of Sequences: 53049
Number of extensions: 381957
Number of successful extensions: 781
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)