Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0165
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    25   0.85 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   1.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   6.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   6.0  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 61  KCPMCRRTFTNAVRL 105
           +CP+C + FTNA+ L
Sbjct: 196 QCPVCHKKFTNALVL 210


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -2

Query: 632 FNRGSEISKTFFRPCYTSLDFSV*ISC*NIYIDVSLKF*FICINIYP*IQKEGLRLLK*Y 453
           FN+G E+SK     C +   F +  +  N+Y+ + L F     + Y  I   G+R+ + Y
Sbjct: 93  FNQGYELSKQEIFNCCSKKSFRMNFAIFNLYMVLLLLF-----DAYLWISSVGVRMFQYY 147


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 632 FNRGSEISKTFFRPCYTSL 576
           FN  + ++K FFRP   SL
Sbjct: 232 FNNITSVAKQFFRPVELSL 250


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 237 FVNLFNVKITGYAVSFEGWFQHASG 163
           F+N+ ++ I    +SF  WF++ +G
Sbjct: 575 FLNVSSIPIYFKWLSFLSWFRYGNG 599


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 237 FVNLFNVKITGYAVSFEGWFQHASG 163
           F+N+ ++ I    +SF  WF++ +G
Sbjct: 575 FLNVSSIPIYFKWLSFLSWFRYGNG 599


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,794
Number of Sequences: 336
Number of extensions: 3623
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)