Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0165
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0542 + 4071906-4072241,4073093-4073184,4073275-4073317,407... 47 2e-05
06_01_1014 - 7936514-7936530,7936768-7936859,7937290-7937581,793... 37 0.015
03_05_0617 + 26163161-26163595,26163678-26164202 37 0.020
07_03_0207 - 15183894-15184685,15184993-15185078,15186042-151861... 36 0.034
04_03_0815 - 19949584-19950111,19950210-19950632 36 0.034
02_01_0238 - 1576211-1576759,1577315-1577664,1578684-1578816 36 0.045
05_04_0224 - 19198722-19198835,19198947-19199436,19200478-192006... 35 0.079
03_05_1059 - 30020877-30021539,30022367-30022375 34 0.10
05_01_0299 - 2322204-2322734,2324089-2326164 34 0.14
02_04_0043 + 19185969-19186036,19186205-19187342 33 0.18
09_04_0088 + 14494711-14494931,14496309-14496399,14496496-144965... 33 0.32
04_03_0817 + 20003128-20003189,20003270-20003693,20003788-20004345 33 0.32
01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320 32 0.56
10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704... 31 0.74
11_06_0010 + 19235419-19236450 31 0.98
03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 31 1.3
11_06_0007 - 19171122-19172036 30 1.7
03_02_0458 + 8643804-8643904,8643994-8644091,8644206-8644504,864... 30 2.3
10_08_1005 - 22179407-22180122,22180210-22180653,22180737-221808... 29 3.0
08_01_0071 - 507595-507762,508027-508155,508567-508752,509306-50... 29 3.9
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497... 29 3.9
02_05_0827 - 32051086-32051445 29 3.9
01_06_1819 + 40110697-40110721,40110818-40110828,40111228-401115... 29 3.9
01_05_0220 - 19434011-19434802 29 5.2
06_03_0038 - 15778446-15778577,15778685-15779020,15779106-157792... 28 6.9
05_01_0002 - 8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,9... 28 6.9
>03_01_0542 +
4071906-4072241,4073093-4073184,4073275-4073317,
4073601-4073720,4073785-4073949,4074042-4074163,
4074357-4074476,4074645-4074936
Length = 429
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 5/39 (12%)
Frame = +1
Query: 7 FVPCGHVVACAKCALSTDK-----CPMCRRTFTNAVRLY 108
F+PCGH+V C KCAL ++ CPMCR+ +R+Y
Sbjct: 389 FIPCGHLVCCCKCALIVERQFDPLCPMCRQDIRYMIRIY 427
>06_01_1014 -
7936514-7936530,7936768-7936859,7937290-7937581,
7937690-7937759,7938131-7938223
Length = 187
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = +1
Query: 7 FVPCGHVVACAKCA--LSTDK---CPMCRRTFTNAVRL 105
F+PCGH AC CA ++ DK CP+CRR RL
Sbjct: 137 FIPCGHGFACFTCARRIAEDKNQACPICRRLIHRVRRL 174
>03_05_0617 + 26163161-26163595,26163678-26164202
Length = 319
Score = 36.7 bits (81), Expect = 0.020
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 1 VCFVPCGHVVACAKCALSTDKCPMCRRTFTNAVRLYFS 114
V +PC H+ ACA CA + CP C +V + FS
Sbjct: 282 VLLLPCRHLCACAPCAAAAAACPACGCAKNGSVSVNFS 319
>07_03_0207 -
15183894-15184685,15184993-15185078,15186042-15186144,
15186890-15186971,15187112-15187203,15187295-15187383,
15187467-15187547,15188610-15188724,15188894-15188935
Length = 493
Score = 35.9 bits (79), Expect = 0.034
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = +1
Query: 10 VPCGHVVACAKCALSTDK----CPMCRRTFTNAVRLY 108
+PCGH+ C C + CP+CR +RLY
Sbjct: 455 IPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRLY 491
>04_03_0815 - 19949584-19950111,19950210-19950632
Length = 316
Score = 35.9 bits (79), Expect = 0.034
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 1 VCFVPCGHVVACAKCALSTDKCPMCRRTFTNAVRLYFS 114
V +PC H+ C C + D CP+C T +V + S
Sbjct: 279 VLLLPCRHLCLCGACEAAADACPVCAATKNASVHVLLS 316
>02_01_0238 - 1576211-1576759,1577315-1577664,1578684-1578816
Length = 343
Score = 35.5 bits (78), Expect = 0.045
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 1 VCFVPCGHVVACAKCALSTDKCPMCR 78
V +PC H+ CA C + D CP+CR
Sbjct: 306 VLVMPCRHLCLCADCEKNADVCPVCR 331
>05_04_0224 -
19198722-19198835,19198947-19199436,19200478-19200641,
19202534-19202632,19204069-19204175,19204278-19204401,
19205113-19205242,19205314-19205433,19205861-19206002,
19207243-19207326,19207651-19207742,19207855-19207944,
19208057-19208136,19208312-19208451,19208587-19209067
Length = 818
Score = 34.7 bits (76), Expect = 0.079
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 4/27 (14%)
Frame = +1
Query: 13 PCGHVVACAKCA----LSTDKCPMCRR 81
PC H+ C++CA TDKCP+CR+
Sbjct: 777 PCRHLCMCSECAKTLRFQTDKCPICRQ 803
>03_05_1059 - 30020877-30021539,30022367-30022375
Length = 223
Score = 34.3 bits (75), Expect = 0.10
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 16 CGHVVACAKCALSTDKCPMCR 78
CGH CA+C+ D CP+CR
Sbjct: 46 CGHASLCAECSQRCDVCPICR 66
>05_01_0299 - 2322204-2322734,2324089-2326164
Length = 868
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 5/31 (16%)
Frame = +1
Query: 1 VCFVPCGHVVACAKCALSTDK-----CPMCR 78
V F+PC H V CAKC DK CP CR
Sbjct: 824 VVFLPCAHQVVCAKCNDLHDKQGMKECPSCR 854
>02_04_0043 + 19185969-19186036,19186205-19187342
Length = 401
Score = 33.5 bits (73), Expect = 0.18
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 1 VCFVPCGHVVACAKCALSTDKCPMCRRT 84
V +PC H+ C C + D CP+C T
Sbjct: 364 VLLLPCRHLCLCRGCEAAADACPVCAAT 391
>09_04_0088 +
14494711-14494931,14496309-14496399,14496496-14496571,
14496671-14496755,14497381-14497450,14499111-14499316,
14499434-14499508,14501043-14501133,14501400-14501441,
14501661-14501741,14502010-14502089,14502254-14502365
Length = 409
Score = 32.7 bits (71), Expect = 0.32
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 1 VCFVPCGHVVACAKCALSTDKCPMCRRTFTN 93
+ +PC H V C C+ CP+CR + N
Sbjct: 361 IVLLPCRHYVLCEACSDKCRSCPICRVSIEN 391
>04_03_0817 + 20003128-20003189,20003270-20003693,20003788-20004345
Length = 347
Score = 32.7 bits (71), Expect = 0.32
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 10 VPCGHVVACAKCALSTDKCPMCRRTFTNAVRLYFS 114
+PC H+ C C + D CP+C T ++ + S
Sbjct: 313 LPCRHLCLCRGCEAAVDACPVCAATKNASLHVLLS 347
>01_04_0052 + 15435709-15436004,15437760-15438255,15439171-15439320
Length = 313
Score = 31.9 bits (69), Expect = 0.56
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Frame = +1
Query: 10 VPCGHVVACAKCA----LSTDKCPMCRR 81
+PC H+ C +CA T+KCP+CR+
Sbjct: 259 LPCRHMCLCRECAQVLKYQTNKCPICRQ 286
>10_03_0012 -
7037088-7037282,7037453-7037954,7038079-7038081,
7040633-7041213
Length = 426
Score = 31.5 bits (68), Expect = 0.74
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 4/28 (14%)
Frame = +1
Query: 10 VPCGHVVACAKCA----LSTDKCPMCRR 81
+PC H+ C++CA T++CP+CR+
Sbjct: 357 LPCRHMCMCSECAKVLRYQTNRCPICRQ 384
>11_06_0010 + 19235419-19236450
Length = 343
Score = 31.1 bits (67), Expect = 0.98
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 1 VCFVPCGHVVACAKCALSTDKCPMC 75
V +PC H+ C C D CP+C
Sbjct: 306 VLLLPCRHLCLCKACEPKLDACPVC 330
>03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105
Length = 430
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Frame = +1
Query: 10 VPCGHVVACAKCA----LSTDKCPMCRR 81
+PC H+ C++CA T +CP+CR+
Sbjct: 352 LPCRHMCMCSECAKVLRYQTTRCPICRQ 379
>11_06_0007 - 19171122-19172036
Length = 304
Score = 30.3 bits (65), Expect = 1.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 1 VCFVPCGHVVACAKCALSTDKCPMC 75
V +PC H+ C C + CP+C
Sbjct: 264 VLLLPCRHLCLCRACEARAEACPVC 288
>03_02_0458 +
8643804-8643904,8643994-8644091,8644206-8644504,
8645930-8646460
Length = 342
Score = 29.9 bits (64), Expect = 2.3
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 10 VPCGHVVACAKCALSTDKCPMCRRTFTNAVRLY 108
+PC H+ C +C CP+C+ + + +Y
Sbjct: 309 LPCRHLCLCKECESKLSFCPLCQSSKILGMEIY 341
>10_08_1005 -
22179407-22180122,22180210-22180653,22180737-22180861,
22180939-22181169,22181250-22181805,22181896-22182312,
22182405-22183216,22183653-22183738,22184464-22184534,
22184553-22185573,22186018-22186062,22186252-22186326,
22186797-22186871
Length = 1557
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = -1
Query: 288 VNSRVLTSSYTLPHRYQFVNLFNVKITGYA----VSFEGWFQHASGPPGEVTSIQLARRV 121
+ S+ + SS TLP Y NL NVK G + +S + F ++S P +V QLA V
Sbjct: 697 MRSQAVNSSVTLPRSYSLGNLANVKTPGPSPRGLLSKQPSFNNSSNEP-KVK--QLAEPV 753
Query: 120 LSR 112
LS+
Sbjct: 754 LSK 756
>08_01_0071 -
507595-507762,508027-508155,508567-508752,509306-509381,
509477-509559,509778-509885,510420-510497,511762-511827
Length = 297
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -1
Query: 207 GYAVSFEGWFQHASGPPGEVTSIQLARRVLSREVEPHRIRERPATHRALVRR 52
GY VSFEGW P V S++ R+ E +E AT A+ R+
Sbjct: 124 GYYVSFEGWGNKEEVDPANVRSLEEEAADALRQAE----KEAEATKMAIKRK 171
>07_03_0493 +
18747427-18748356,18748594-18748697,18749586-18749795,
18749992-18750597,18750819-18751095,18751163-18751310,
18751957-18752044,18752167-18752284
Length = 826
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = +1
Query: 16 CGHVVACAKCA----LSTDKCPMCRRTFTNAVRLYFS 114
CGH+ C CA S CP+C+ + VR + +
Sbjct: 789 CGHMCTCFNCADQLKSSNRSCPICQSPIEDVVRAHMN 825
>02_05_0827 - 32051086-32051445
Length = 119
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 1 VCFVPCGHVVACAKCALSTDKCP 69
V VPCG VVA +C + +CP
Sbjct: 63 VVVVPCGLVVAMTRCPAAAARCP 85
>01_06_1819 +
40110697-40110721,40110818-40110828,40111228-40111572,
40111707-40111782,40113605-40113771,40113818-40114036
Length = 280
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = +1
Query: 16 CGHVVA--CAKCALSTDK-CPMCRR--TFTNAVRLY 108
CGH+ C K ++ K CP CRR T N R+Y
Sbjct: 240 CGHIFCKQCIKASIQAQKKCPTCRRKLTMNNFHRVY 275
>01_05_0220 - 19434011-19434802
Length = 263
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = +1
Query: 10 VPCGHVV---ACAKCALSTDKCPMCRRTFTNAV 99
+PCGH A L CPMCRR F+ V
Sbjct: 203 LPCGHAFHGQCIAGWLLEGRTCPMCRRDFSRLV 235
>06_03_0038 -
15778446-15778577,15778685-15779020,15779106-15779225,
15779280-15779765,15779861-15779994,15780111-15780230,
15784881-15785018,15785404-15786079,15786179-15786340,
15786424-15786618,15786839-15787084,15787758-15787952
Length = 979
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 318 SLQITNSFLHVNSRVLTSSYTLPHRYQFVNL--FNVKITGYAVSFE 187
+LQI N F+ + +LT S LPH V + ++ T A SF+
Sbjct: 699 TLQIHNCFILILPHLLTQSNILPHSPHLVEVDCYSANATDIAASFK 744
>05_01_0002 - 8097-8246,8384-8495,8572-8735,9367-9519,9603-9732,
9802-9902,10016-10651,10820-10899,11014-11673,
11787-12041,12154-12281,12515-12669,12735-12919,
13020-13049,13164-13239,13371-13504,13703-13994,
14400-14567,14647-14745,14843-15014,15103-15281
Length = 1352
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 306 TNSFL-HVNSRVLTSSYTLPHRYQFVNLFNVKI 211
T FL H+ R ++SS T+P + FV + VK+
Sbjct: 1310 TEDFLFHIRKRRVSSSGTIPEKADFVKAYAVKV 1342
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,097,085
Number of Sequences: 37544
Number of extensions: 340129
Number of successful extensions: 840
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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