Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0164
         (808 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635...    29   3.3  
01_01_0101 - 766382-767487,767599-767756,767900-768615                 29   3.3  
02_05_0908 + 32668706-32669140,32669772-32669957,32670316-326704...    29   4.4  
06_01_0740 - 5473895-5474061,5474153-5474399,5475207-5475336,547...    29   5.8  
04_04_1691 - 35393728-35394585                                         29   5.8  

>08_02_1457 +
           27260841-27260965,27261126-27261246,27263455-27263543,
           27263776-27263860,27263970-27264074,27264446-27264527,
           27264573-27264686,27265029-27265330,27265519-27266114,
           27266216-27266376,27266489-27266592,27266697-27266856,
           27266942-27267105,27267213-27267545,27267640-27267930,
           27268276-27268359,27268430-27268563,27268665-27268892,
           27268993-27269164,27269263-27269517,27269778-27270047
          Length = 1324

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = -2

Query: 627 FHFWSFEAVSNR--S*RSLTYSWYWYWYNLGICDLGTGITLVFAILVFGMLQ 478
           FHF +   V       R L   W+WYW  + I     G +LVF IL    LQ
Sbjct: 630 FHFANANTVGETILKVRGLLTEWHWYWICVSIL---FGFSLVFNILSIFALQ 678


>01_01_0101 - 766382-767487,767599-767756,767900-768615
          Length = 659

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -2

Query: 657 EELINVFIIRFHFWSFEAVSNRS*RSLTYSW 565
           E + N+ II F+FWS   + +RS  +L Y++
Sbjct: 247 ERIANIAIIDFYFWSCFLLGDRSHNNLIYTY 277


>02_05_0908 +
           32668706-32669140,32669772-32669957,32670316-32670414,
           32671010-32671147,32672276-32672533,32675009-32675272,
           32675426-32675571,32675762-32675839,32676746-32676875,
           32677040-32677286,32677374-32677423,32677767-32677869,
           32678332-32678354
          Length = 718

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/76 (26%), Positives = 36/76 (47%)
 Frame = -2

Query: 621 FWSFEAVSNRS*RSLTYSWYWYWYNLGICDLGTGITLVFAILVFGMLQPIQT*THYNTEY 442
           FW F+ +S  +  +L  S++ +     +  +G G+ L+FA+L+  M   +Q       E 
Sbjct: 456 FWGFQQISTLA-GNLVPSYFAWEVLFTMAIIGLGL-LLFALLIGNMQNFLQALGRRRLEM 513

Query: 441 SLRRNSYNIYLCRLRL 394
            LRR     ++   RL
Sbjct: 514 QLRRRDVEQWMSHRRL 529


>06_01_0740 -
           5473895-5474061,5474153-5474399,5475207-5475336,
           5475874-5475951,5476192-5476337,5476661-5476906,
           5477498-5477746,5478356-5478493,5479015-5479113,
           5479456-5479641,5480477-5480896
          Length = 701

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 22/88 (25%), Positives = 41/88 (46%)
 Frame = -2

Query: 621 FWSFEAVSNRS*RSLTYSWYWYWYNLGICDLGTGITLVFAILVFGMLQPIQT*THYNTEY 442
           FW F+ +S  +  +L  S++ +     +  +G G+ L+FA+L+  M   +Q       E 
Sbjct: 442 FWGFQQISTLA-GNLIPSYFVWEVIFTMAIIGLGL-LLFALLIGSMQNFLQALGKRRLEM 499

Query: 441 SLRRNSYNIYLCRLRLRYSIK*LVPARE 358
            LRR     ++   RL   ++  V + E
Sbjct: 500 QLRRRDVEQWMSHRRLPEDLRRRVRSAE 527


>04_04_1691 - 35393728-35394585
          Length = 285

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 519 YQYQDRKYQGYTNTNTKNMSVTSMTYWK 602
           + Y+DRKY     T T+    T+  +WK
Sbjct: 67  FSYKDRKYPSARGTGTRTNRATAAGFWK 94


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,043,146
Number of Sequences: 37544
Number of extensions: 333178
Number of successful extensions: 704
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)