Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0164
         (808 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.27 
SB_49327| Best HMM Match : PKD_channel (HMM E-Value=0)                 28   7.7  

>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1459

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 488 PNTKIAKTKVIPVPRSQIPRLYQYQYQEYVSDLYDLLETASKLQK 622
           P  K+AKTK +P PR Q+P+      +  +    DL  T S+  K
Sbjct: 206 PPPKLAKTKPVPPPRLQVPKSILNDCESVIPSKPDLTGTLSRQNK 250


>SB_49327| Best HMM Match : PKD_channel (HMM E-Value=0)
          Length = 1196

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = -2

Query: 651 LINVFIIRFHFWSFEAVSNRS*RSLTYSWYWYWYNLGICDLGTGITLV 508
           L+ +F++ F +  F+ +  +    L   W W    L +C LG  +T++
Sbjct: 724 LLLIFVLIFMYQEFKKIFKQRKAYLREVWNWMELALIVCVLGCAVTIL 771


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,919,180
Number of Sequences: 59808
Number of extensions: 409410
Number of successful extensions: 779
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2239700683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)