Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0164
         (808 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation transp...    30   1.7  
AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation transp...    30   1.7  
AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical...    30   1.7  
AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical...    30   1.7  
Z74030-19|CAA98449.2|  841|Caenorhabditis elegans Hypothetical p...    29   3.9  
Z72508-10|CAA96644.2|  841|Caenorhabditis elegans Hypothetical p...    29   3.9  
AF036706-18|AAK39278.1|  448|Caenorhabditis elegans Enhanced rna...    29   5.2  
AF036706-17|AAK39277.2|  582|Caenorhabditis elegans Enhanced rna...    29   5.2  
AL021175-6|CAA15968.1|  363|Caenorhabditis elegans Hypothetical ...    28   9.0  

>AM419898-1|CAL99238.1| 1121|Caenorhabditis elegans cation
           transporting ATPase protein.
          Length = 1121

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 698 KSYKNSCWNLLIKEACIFFIQAQPEDILNLLSFVR 802
           K+YK S WNLL+K   I F +   E  L ++  V+
Sbjct: 771 KNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQ 805


>AM419897-1|CAL99237.1| 1045|Caenorhabditis elegans cation
           transporting ATPase protein.
          Length = 1045

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 698 KSYKNSCWNLLIKEACIFFIQAQPEDILNLLSFVR 802
           K+YK S WNLL+K   I F +   E  L ++  V+
Sbjct: 771 KNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQ 805


>AL132876-35|CAN99760.1| 1045|Caenorhabditis elegans Hypothetical
           protein Y105E8A.12b protein.
          Length = 1045

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 698 KSYKNSCWNLLIKEACIFFIQAQPEDILNLLSFVR 802
           K+YK S WNLL+K   I F +   E  L ++  V+
Sbjct: 771 KNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQ 805


>AL132876-34|CAD21662.2| 1121|Caenorhabditis elegans Hypothetical
           protein Y105E8A.12a protein.
          Length = 1121

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 698 KSYKNSCWNLLIKEACIFFIQAQPEDILNLLSFVR 802
           K+YK S WNLL+K   I F +   E  L ++  V+
Sbjct: 771 KNYKKSDWNLLLKNHNIVFARTNTEQKLEIVQEVQ 805


>Z74030-19|CAA98449.2|  841|Caenorhabditis elegans Hypothetical
           protein F28H7.10a protein.
          Length = 841

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
 Frame = -2

Query: 570 SWYWY--WYNLGICDLGTGITLVFAILV-FGMLQPI 472
           +W WY  W+ LG C++ T I ++F IL+ FG ++ I
Sbjct: 495 AWPWYHGWFRLG-CEIMTIIVMLFQILLDFGDIRRI 529


>Z72508-10|CAA96644.2|  841|Caenorhabditis elegans Hypothetical
           protein F28H7.10a protein.
          Length = 841

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
 Frame = -2

Query: 570 SWYWY--WYNLGICDLGTGITLVFAILV-FGMLQPI 472
           +W WY  W+ LG C++ T I ++F IL+ FG ++ I
Sbjct: 495 AWPWYHGWFRLG-CEIMTIIVMLFQILLDFGDIRRI 529


>AF036706-18|AAK39278.1|  448|Caenorhabditis elegans Enhanced rnai
           (rna interference)protein 1, isoform a protein.
          Length = 448

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 619 KVEPNYKNIDKFFNFNFTIQFKARVVEIV*KFLLELI 729
           K+EPN     +FF++   I F+   VEI+  +  E+I
Sbjct: 136 KMEPNADKTARFFDYLIAIDFECTCVEIIYDYPHEII 172


>AF036706-17|AAK39277.2|  582|Caenorhabditis elegans Enhanced rnai
           (rna interference)protein 1, isoform b protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 619 KVEPNYKNIDKFFNFNFTIQFKARVVEIV*KFLLELI 729
           K+EPN     +FF++   I F+   VEI+  +  E+I
Sbjct: 136 KMEPNADKTARFFDYLIAIDFECTCVEIIYDYPHEII 172


>AL021175-6|CAA15968.1|  363|Caenorhabditis elegans Hypothetical
           protein Y6E2A.7 protein.
          Length = 363

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 714 EFLYDFHDASFKLNSEIKIEELINV 640
           +F Y F DA  K N  IK E+ +NV
Sbjct: 165 KFYYTFSDAEKKKNGRIKSEQFLNV 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,092,524
Number of Sequences: 27780
Number of extensions: 344032
Number of successful extensions: 807
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)