Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0163
(354 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 26 2.0
SPCC777.08c |||HbrB family protein|Schizosaccharomyces pombe|chr... 25 2.6
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 25 3.4
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 25 3.4
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 25 4.5
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 24 6.0
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 24 6.0
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 24 6.0
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 24 7.9
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 24 7.9
SPCC663.02 |wtf14||wtf element Wtf14|Schizosaccharomyces pombe|c... 24 7.9
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 25.8 bits (54), Expect = 2.0
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3
Query: 181 SLNSFIASSREHLPIIRLAMLDDLVAFQSEDRFERSGISWLNEDESTEL 35
+L++F SSRE L + L L D ++ E E IS + +DE L
Sbjct: 175 NLDTFPDSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTL 223
>SPCC777.08c |||HbrB family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 422
Score = 25.4 bits (53), Expect = 2.6
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 187 PFSLNSFIASSREHLPIIRLAML 119
P+ +N F +++RE L + RLA++
Sbjct: 328 PYEVNEFCSTNREKLNVHRLALM 350
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 25.0 bits (52), Expect = 3.4
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 351 SHRKCSESPGAVPWEAA 301
+H SE PG+VPW A
Sbjct: 155 AHTTSSEIPGSVPWRRA 171
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 25.0 bits (52), Expect = 3.4
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 214 RTTSGAREQLQIHRPNGTRTPGRCRGQPPSGLPRYRSRALTALAV 348
RT + ARE L+ R N +R+P + S L R+ ++L+V
Sbjct: 681 RTENSARESLRHSRSNMSRSPSPMLSRRSSTLRPSFERSASSLSV 725
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 24.6 bits (51), Expect = 4.5
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = -2
Query: 329 ARERYLGRPLGGWPRHLPGVRVPLGRCICNCSRAPDVVL----VGIVRRIQAVQSELLHR 162
A R GRP+G P L P C +PD+ + GI+R+++ +Q +
Sbjct: 514 ALSRMRGRPVGFCPLQLDFNNWPKFLCCLQGFVSPDIAMRLFQSGILRKLRDLQEQYSRT 573
Query: 161 VIQRAFT 141
+ A T
Sbjct: 574 DVALAMT 580
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 24.2 bits (50), Expect = 6.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 261 WNTYSRQVSWPAPERPPKVPLP 326
W TY+ Q + +P+ P +P P
Sbjct: 205 WLTYNAQFAQNSPQLAPSIPSP 226
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 24.2 bits (50), Expect = 6.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 207 PDEDNIWSARAVADTSTQWNTYSRQV 284
PD+ N++ A T WN + QV
Sbjct: 71 PDQVNLFRGHTAAVLDTDWNPFHDQV 96
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 24.2 bits (50), Expect = 6.0
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = +3
Query: 192 DSPYNPDEDNIWSARAVADTSTQWNTY 272
+ P+N + + W+A+ + D S +WN++
Sbjct: 29 NEPWNLNRN--WTAQKILDYSAEWNSH 53
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 23.8 bits (49), Expect = 7.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 47 IHRAPTYRNHYNCNI 3
IH PTY H+ C+I
Sbjct: 20 IHALPTYTVHWKCSI 34
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 23.8 bits (49), Expect = 7.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 224 LERASSCRYIDPMEHVLQAGVVASPRAASQGTA 322
L AS+ R +DP+E +LQA + R A T+
Sbjct: 1953 LPPASNNRKVDPLEDILQAMPPPTTRKARGKTS 1985
>SPCC663.02 |wtf14||wtf element Wtf14|Schizosaccharomyces pombe|chr
3|||Manual
Length = 222
Score = 23.8 bits (49), Expect = 7.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 207 PDEDNIWSARAVADTSTQWNT 269
P + + A VADT T W+T
Sbjct: 49 PADHKVMEASKVADTRTAWST 69
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,621,551
Number of Sequences: 5004
Number of extensions: 32863
Number of successful extensions: 118
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 105935336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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