Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0163
         (354 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_27216| Best HMM Match : Lectin_C (HMM E-Value=1.9)                  29   1.1  
SB_14189| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.4  
SB_5471| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   1.4  
SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0)                 28   1.9  
SB_19545| Best HMM Match : VWA (HMM E-Value=0.00034)                   28   2.5  
SB_52061| Best HMM Match : BCNT (HMM E-Value=4.7)                      27   3.3  
SB_45516| Best HMM Match : I-set (HMM E-Value=1.1e-26)                 27   3.3  
SB_41939| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.3  
SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26)                 27   3.3  
SB_45116| Best HMM Match : EGF (HMM E-Value=0)                         27   4.4  
SB_58065| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.8  
SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24)                 27   5.8  
SB_9406| Best HMM Match : Pneumo_att_G (HMM E-Value=2)                 27   5.8  
SB_28914| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.7  
SB_16514| Best HMM Match : Paxillin (HMM E-Value=3.7)                  26   7.7  
SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.7  
SB_35068| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.7  
SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   7.7  

>SB_27216| Best HMM Match : Lectin_C (HMM E-Value=1.9)
          Length = 168

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 21/62 (33%), Positives = 26/62 (41%)
 Frame = -2

Query: 353 GHTASAVRARERYLGRPLGGWPRHLPGVRVPLGRCICNCSRAPDVVLVGIVRRIQAVQSE 174
           GHTASA R R  +   P  G       VRV  G CI +    P +  + I RR       
Sbjct: 90  GHTASAARERNTFSATPEDGCMPGSSPVRV-FGNCILHSQSDPQLQRI-IFRRFCGAAGR 147

Query: 173 LL 168
           L+
Sbjct: 148 LV 149


>SB_14189| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 328

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 347 TASAVRARERYLGRPLGGWPRHLPGVRVPL 258
           TA A +AR  Y   P GG PR+  G+R  L
Sbjct: 165 TAEAKQARHPYAHLPFGGGPRNCIGMRFAL 194


>SB_5471| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 549

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 347 TASAVRARERYLGRPLGGWPRHLPGVRVPL 258
           TA A +AR  Y   P GG PR+  G+R  L
Sbjct: 465 TAEAKQARHPYAHLPFGGGPRNCIGMRFAL 494


>SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0)
          Length = 2376

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 93   SDWNATKSSSIANLMIGKCSLDDAMK 170
            SDW   +   + NL++GK S  DA K
Sbjct: 2293 SDWRTYREGLVENLVLGKMSRQDAAK 2318


>SB_19545| Best HMM Match : VWA (HMM E-Value=0.00034)
          Length = 286

 Score = 27.9 bits (59), Expect = 2.5
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 213 EDNI-WSARAVADTSTQWNTYSRQVSWPAPERPPKVPLPGSHC 338
           E N+ ++A    D  T WN   +Q+  P P + P  P  G  C
Sbjct: 81  EPNLKFTANKPEDFRTLWNDIEKQMCSPKPGKCPPSPPSGGSC 123


>SB_52061| Best HMM Match : BCNT (HMM E-Value=4.7)
          Length = 485

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 164 DEGVQTERLGFSVQSRRGQHLERASSCRYIDPMEHVLQAGV 286
           D+GV T+  GF V   R    ER  + R + P   VL+  +
Sbjct: 34  DKGVSTQLRGFEVSDERANKCERGKNVR-VFPGSEVLRENI 73


>SB_45516| Best HMM Match : I-set (HMM E-Value=1.1e-26)
          Length = 939

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +3

Query: 168 KEFRLNGLDSPYNPDEDNIWSARAVADTSTQWNTYSRQVSWPAPERPPKVPL 323
           +E  ++GL  PY     ++       +    W  YS +VS   PE PP  P+
Sbjct: 832 REMLISGL-YPYAQYTISVCEGTGGINRGVMWGPYSDRVSVEMPEGPPSRPV 882


>SB_41939| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 819

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
 Frame = +3

Query: 84  NLSSDWNATKSSSIANLMIGKCSLDDAMKEFRLNGLDSPY--NPDEDNIWSA--RAVADT 251
           NL+S  + +  SSI++++ G C L DA   F     DS Y  +PD+D   S     +  +
Sbjct: 627 NLTSGKDRSSVSSISSIVSGLCPL-DASGSF----TDSQYSMSPDQDFYSSVDYATITPS 681

Query: 252 STQWNTYSRQVS-WPAPERPPKVPLP 326
                T +R+ S  P P +P K   P
Sbjct: 682 GKSEETSTRESSNPPLPYKPRKASAP 707


>SB_10571| Best HMM Match : Cas1p (HMM E-Value=1.8e-26)
          Length = 765

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 288 TTPAWSTCSIGSMYLQLLARS 226
           T+P W   S G  YL LLAR+
Sbjct: 256 TSPFWPAMSFGQQYLALLARN 276


>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
          Length = 2023

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 201 TENPSRSV*TPSSRHPESIYRSSDWQCWMTWWHSNRK 91
           T  P  SV  P S HP++  ++++ + W    HS RK
Sbjct: 523 TPIPLTSV-APKSPHPQASAKATEAKLWFAQLHSKRK 558


>SB_58065| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 600

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 171 PSSRHPESIYRSSDWQCWMTW 109
           P + HP  I R  D +CWM +
Sbjct: 345 PRASHPSEIERHVDLRCWMAF 365


>SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24)
          Length = 540

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -3

Query: 271 YVFHWVDVSATARALQMLSSS--GLYGESKPFSLNSFIASSREHLP 140
           Y++ + +V       ++L S   GLY   +P S+N F   S  H+P
Sbjct: 278 YIYAYRNVELKRTFWKVLESCLCGLYKRDRPGSINDFHRRSEVHMP 323


>SB_9406| Best HMM Match : Pneumo_att_G (HMM E-Value=2)
          Length = 407

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 189 LDSPYNPDEDNIWSARAVADTSTQWNTYSRQVSWPAPE 302
           +D PY P++DN  +    +         SR+V WP P+
Sbjct: 156 IDVPYEPEQDNFIAIAPRSSNLPPSQDKSREV-WPKPQ 192


>SB_28914| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1016

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 173 VQTERLGFSVQSRRGQHLERASSCRYIDPMEHV 271
           VQ     +  Q   G HL +A+ C Y++ + HV
Sbjct: 664 VQANECYYVNQVTHGAHLVQANECYYVNQVTHV 696


>SB_16514| Best HMM Match : Paxillin (HMM E-Value=3.7)
          Length = 311

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = -3

Query: 220 LSSSGLYGESKPFSLNSFIASSREH----LPIIR-LAMLDDLVAFQSEDRFERSGISWLN 56
           ++SS +YG SK  S  SF+    E     + I++ +      + + S+ + + S  SWLN
Sbjct: 208 VASSSIYGPSKSPSFESFLDGEEESKGKPVGILKNILKASKSMMYPSDSKHKPSPRSWLN 267

Query: 55  E 53
           +
Sbjct: 268 D 268


>SB_15224| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1060

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = -2

Query: 335 VRARERYLGRPLGGWP-RHLPGVRV-PLG 255
           VR +  Y  RP+GG+P RH+ G  V P+G
Sbjct: 907 VRPKSGYPVRPMGGYPVRHVGGYPVRPVG 935


>SB_35068| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 532

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
 Frame = +3

Query: 72  PLRSNLSSDWNATKSSSIANLMIGKCSLD-DAMKEFRLNGLDSPYNPDEDNIWSARAVAD 248
           PL    +  W+  + S IA +    C +  D    F+  G           I +  A   
Sbjct: 102 PLALPQNGAWDRDECSKIAQVCKATCMITCDEANGFKAEGA---------TIRTCGATGQ 152

Query: 249 TSTQWNTYSRQVSWPAPERPPKV 317
            ST WNTY + +  P+ + P  +
Sbjct: 153 WSTPWNTYCKDILPPSLKCPDSI 175


>SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 970

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +3

Query: 237 AVADTSTQWNTYSRQVSWPAPERPPKVPLPGSHCTCGV 350
           A+   S Q    S   S P P  PP VP+   H T G+
Sbjct: 560 AITAASLQRKDLSATSSLPPPP-PPGVPITSLHATAGI 596


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,933,621
Number of Sequences: 59808
Number of extensions: 276377
Number of successful extensions: 1002
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 548040812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)