BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0163
(354 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127072-1|BAC86813.1| 156|Homo sapiens protein ( Homo sapiens ... 32 0.44
AK000468-1|BAA91185.1| 326|Homo sapiens protein ( Homo sapiens ... 30 2.4
AF462153-1|AAL59618.2| 388|Homo sapiens C21orf55 protein protein. 30 2.4
L13977-1|AAA99891.1| 496|Homo sapiens prolylcarboxypeptidase pr... 29 4.1
BC001500-1|AAH01500.1| 496|Homo sapiens prolylcarboxypeptidase ... 29 4.1
AL357033-4|CAC14922.1| 111|Homo sapiens chromosome 20 open read... 29 5.4
M94173-1|AAA51898.1| 2237|Homo sapiens N-type calcium channel al... 28 7.2
BC044254-1|AAH44254.1| 1186|Homo sapiens partner and localizer o... 28 7.2
AL834425-1|CAD39086.1| 1013|Homo sapiens hypothetical protein pr... 28 7.2
AL772363-1|CAI17141.1| 2237|Homo sapiens calcium channel, voltag... 28 7.2
AL591424-1|CAI40685.1| 2237|Homo sapiens calcium channel, voltag... 28 7.2
AL390866-5|CAI12711.1| 1044|Homo sapiens novel protein protein. 28 7.2
AL390866-4|CAI12710.1| 389|Homo sapiens novel protein protein. 28 7.2
AL355372-1|CAI16402.1| 1044|Homo sapiens novel protein protein. 28 7.2
>AK127072-1|BAC86813.1| 156|Homo sapiens protein ( Homo sapiens
cDNA FLJ45129 fis, clone BRAWH3037394. ).
Length = 156
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +3
Query: 228 SARAVADTSTQWNTYSRQVSWPAPERPPKVPLPGSHCTC 344
+AR T W + W P P +P PG HC+C
Sbjct: 2 AARFWPPAQTSWLVHGVFGLWGCPSCPLPLPAPGGHCSC 40
>AK000468-1|BAA91185.1| 326|Homo sapiens protein ( Homo sapiens
cDNA FLJ20461 fis, clone KAT06105. ).
Length = 326
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 194 FSVQSRRGQHLERASSCRYIDPMEHVL 274
F S +G+ L++ S C YIDPM H L
Sbjct: 217 FDNLSGKGKPLKKFSDCSYIDPMTHNL 243
>AF462153-1|AAL59618.2| 388|Homo sapiens C21orf55 protein protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 194 FSVQSRRGQHLERASSCRYIDPMEHVL 274
F S +G+ L++ S C YIDPM H L
Sbjct: 217 FDNLSGKGKPLKKFSDCSYIDPMTHNL 243
>L13977-1|AAA99891.1| 496|Homo sapiens prolylcarboxypeptidase
protein.
Length = 496
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 280 CLEYVFHWVDVSATARALQMLSSSGLYGESKPFSLNSF 167
C F W DV+ +A+ + + YGES PF NSF
Sbjct: 100 CNNTGFMW-DVAEELKAMLVFAEHRYYGESLPFGDNSF 136
>BC001500-1|AAH01500.1| 496|Homo sapiens prolylcarboxypeptidase
(angiotensinase C) protein.
Length = 496
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 280 CLEYVFHWVDVSATARALQMLSSSGLYGESKPFSLNSF 167
C F W DV+ +A+ + + YGES PF NSF
Sbjct: 100 CNNTGFMW-DVAEELKAMLVFAEHRYYGESLPFGDNSF 136
>AL357033-4|CAC14922.1| 111|Homo sapiens chromosome 20 open reading
frame 90 protein.
Length = 111
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 297 PERPPKVPLPGSH 335
PE PPKVP PG+H
Sbjct: 64 PESPPKVPQPGAH 76
>M94173-1|AAA51898.1| 2237|Homo sapiens N-type calcium channel alpha-1
subunit protein.
Length = 2237
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 339 CSESPGAVPWEAARGLATTPAWST 268
C E+P A PW A LA T W +
Sbjct: 2177 CRETPSASPWPLALELALTLTWGS 2200
>BC044254-1|AAH44254.1| 1186|Homo sapiens partner and localizer of
BRCA2 protein.
Length = 1186
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +3
Query: 84 NLSSDWNATKSSSIANLMIGKCSLDDAMKEFRLNGLDSPYNPDEDNIWSARAVADTSTQW 263
NLS++ ++ G+ S + K L + SP P EDN S +AVA +
Sbjct: 452 NLSNEETDQSEIRMSGTCTGQPSSRTSQKLLSLTKVSSPAGPTEDNDLSRKAVAQAPGRR 511
Query: 264 NTYSRQ 281
T R+
Sbjct: 512 YTGKRK 517
>AL834425-1|CAD39086.1| 1013|Homo sapiens hypothetical protein
protein.
Length = 1013
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +3
Query: 84 NLSSDWNATKSSSIANLMIGKCSLDDAMKEFRLNGLDSPYNPDEDNIWSARAVADTSTQW 263
NLS++ ++ G+ S + K L + SP P EDN S +AVA +
Sbjct: 279 NLSNEETDQSEIRMSGTCTGQPSSRTSQKLLSLTKVSSPAGPTEDNDLSRKAVAQAPGRR 338
Query: 264 NTYSRQ 281
T R+
Sbjct: 339 YTGKRK 344
>AL772363-1|CAI17141.1| 2237|Homo sapiens calcium channel,
voltage-dependent, N type, alpha7a (RPL7A) protein.
Length = 2237
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 339 CSESPGAVPWEAARGLATTPAWST 268
C E+P A PW A LA T W +
Sbjct: 2177 CRETPSASPWPLALELALTLTWGS 2200
>AL591424-1|CAI40685.1| 2237|Homo sapiens calcium channel,
voltage-dependent, N type, alpha, alpha protein.
Length = 2237
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 339 CSESPGAVPWEAARGLATTPAWST 268
C E+P A PW A LA T W +
Sbjct: 2177 CRETPSASPWPLALELALTLTWGS 2200
>AL390866-5|CAI12711.1| 1044|Homo sapiens novel protein protein.
Length = 1044
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 72 PLRSNLSSDWNATKSSSIANLMIGKCSLDD 161
P+ L SD+N K +SIA ++GK + DD
Sbjct: 132 PIVKILGSDYNTMKENSIALNILGKITRDD 161
>AL390866-4|CAI12710.1| 389|Homo sapiens novel protein protein.
Length = 389
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 72 PLRSNLSSDWNATKSSSIANLMIGKCSLDD 161
P+ L SD+N K +SIA ++GK + DD
Sbjct: 26 PIVKILGSDYNTMKENSIALNILGKITRDD 55
>AL355372-1|CAI16402.1| 1044|Homo sapiens novel protein protein.
Length = 1044
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 72 PLRSNLSSDWNATKSSSIANLMIGKCSLDD 161
P+ L SD+N K +SIA ++GK + DD
Sbjct: 132 PIVKILGSDYNTMKENSIALNILGKITRDD 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,326,086
Number of Sequences: 237096
Number of extensions: 1396431
Number of successful extensions: 5957
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5955
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -