Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0163
         (354 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr...    28   2.2  
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr...    27   3.8  
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ...    27   3.8  
L14745-11|AAA27919.2|  315|Caenorhabditis elegans Hypothetical p...    27   5.0  
AC024746-10|AAF60400.2|  483|Caenorhabditis elegans Hypothetical...    27   5.0  
Z49913-5|CAA90146.1|  404|Caenorhabditis elegans Hypothetical pr...    26   6.6  
U13645-9|AAM15545.1|  597|Caenorhabditis elegans Hypothetical pr...    26   6.6  
U13645-8|AAM15544.1|  565|Caenorhabditis elegans Hypothetical pr...    26   6.6  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    26   8.7  

>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical
           protein F28B4.3 protein.
          Length = 2229

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 147 CSLDDAMKEFRLNGLDSPYNPDEDNIWS 230
           C+     K++ L G+ S YNPD D  WS
Sbjct: 698 CTFKVYQKKYNLGGM-SQYNPDYDIFWS 724


>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
            presynaptic morphologyprotein 1 protein.
          Length = 3766

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 144  YRSSDWQCWMTWWHSNRKTDL 82
            + +SD++CW T W ++ K D+
Sbjct: 938  HHASDYKCWYTSWATDPKYDM 958


>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
            protein F07B7.12 protein.
          Length = 1900

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 144  YRSSDWQCWMTWWHSNRKTDL 82
            + +SD++CW T W ++ K D+
Sbjct: 938  HHASDYKCWYTSWATDPKYDM 958


>L14745-11|AAA27919.2|  315|Caenorhabditis elegans Hypothetical
           protein C02F5.4 protein.
          Length = 315

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -1

Query: 207 DCTENPSRSV*TPSSRHPESIYRSSDWQCWMTWWHSNRK 91
           D TE   R   T  S HP SI  +S    W+   HSNR+
Sbjct: 3   DFTEQTLRQKLTNLSNHPSSIQTTS---AWLLQNHSNRE 38


>AC024746-10|AAF60400.2|  483|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.2 protein.
          Length = 483

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = -1

Query: 309 EAARGLATTPAWSTCSIGSMYLQLLARSRCCPRRDCTENPSRSV*TPSSRHP 154
           +  RG    P    C    + ++    +RCC +RD +EN +      S+R P
Sbjct: 359 QTCRGPTKAPTMGRCWSDDVMVE---GNRCCAKRDVSENSATLACKKSTRTP 407



 Score = 25.8 bits (54), Expect = 8.7
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = -1

Query: 309 EAARGLATTPAWSTCSIGSMYLQLLARSRCCPRRDCTENPSRSV*TPSSRHPESIYRSSD 130
           E  RG    P    C    + ++    +RCC R + T+N S S  T + R P +   S  
Sbjct: 149 ETCRGPTKAPTMGRCWSDDVMVE---GNRCCARENVTDNFS-SNRTQTCRGPTTAPTSG- 203

Query: 129 WQCW 118
            +CW
Sbjct: 204 -RCW 206


>Z49913-5|CAA90146.1|  404|Caenorhabditis elegans Hypothetical
           protein ZK938.7 protein.
          Length = 404

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -3

Query: 133 RLAMLDDLVAFQSEDRFERSGISWLNEDESTELPLTVI 20
           R  ML     F  E  F+RS I W ++D   +LP+ ++
Sbjct: 273 RSVMLTIRGTFCYETYFKRSAIVWTSKDGKNKLPVELL 310


>U13645-9|AAM15545.1|  597|Caenorhabditis elegans Hypothetical
           protein C05D10.4b protein.
          Length = 597

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3

Query: 273 SRQVSWPAPERPPKVPLPGSHCTCG 347
           SR V  PAP  PPK+    SH T G
Sbjct: 166 SRAVPPPAPPNPPKMEKHMSHDTSG 190


>U13645-8|AAM15544.1|  565|Caenorhabditis elegans Hypothetical
           protein C05D10.4a protein.
          Length = 565

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3

Query: 273 SRQVSWPAPERPPKVPLPGSHCTCG 347
           SR V  PAP  PPK+    SH T G
Sbjct: 134 SRAVPPPAPPNPPKMEKHMSHDTSG 158


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +3

Query: 207 PDEDNIWSARAVADTSTQWNTYSRQVSWPAPERPPKVPLPGS 332
           PD   I SA A AD  T  ++ +     P    P   P P +
Sbjct: 656 PDSSTIPSASAAADAQTTTSSETSTPGEPTSSTPSDTPAPST 697


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,216,213
Number of Sequences: 27780
Number of extensions: 198133
Number of successful extensions: 731
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)