Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0156
         (710 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1461 - 27299891-27301870                                         32   0.52 
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393           30   1.6  
01_01_0780 - 6036454-6037992                                           28   6.4  
09_02_0366 + 7941550-7942161,7942230-7942775                           28   8.4  

>08_02_1461 - 27299891-27301870
          Length = 659

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -1

Query: 509 HPSNRNALLLHGRNRQGGGTHPRGLTRGPTTSVLSFKRF 393
           H ++    LL GR R GGG H RGL   P  S ++  R+
Sbjct: 282 HAADLRKKLLRGRRRGGGGGHRRGLFVFPLVSRMTGARY 320


>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
          Length = 322

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 467 YFCREAAMRFGLKGDLRTYTSRWVAHLRCGC 559
           + CR  A RF ++GD RT+        RC C
Sbjct: 248 FACRRCAKRFAVRGDWRTHEKNCGRLWRCAC 278


>01_01_0780 - 6036454-6037992
          Length = 512

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 20/55 (36%), Positives = 24/55 (43%)
 Frame = -3

Query: 645 LFFDFLFYCLDG*TSSQSTWC*VVTGAHRHPQRKCATHLEV*VLRSPFKPKRIAA 481
           L FDFLF   D   +S S+ C  V+    HP        EV  L SP   + I A
Sbjct: 305 LLFDFLFAAQD---ASTSSLCWAVSALDSHPDVLARVRAEVAALWSPESGEPITA 356


>09_02_0366 + 7941550-7942161,7942230-7942775
          Length = 385

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +2

Query: 467 YFCREAAMRFGLKGDLRTYTSRWVAHLRCGCLW 565
           Y CR    RF ++GD RT+         CG LW
Sbjct: 279 YACRRCGKRFAVRGDWRTHEK------NCGKLW 305


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,793,593
Number of Sequences: 37544
Number of extensions: 425783
Number of successful extensions: 834
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)