BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0155
(787 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X83573-1|CAA58556.1| 589|Homo sapiens ARSE protein. 32 2.0
BC130438-1|AAI30439.1| 589|Homo sapiens arylsulfatase E (chondr... 32 2.0
AK223199-1|BAD96919.1| 589|Homo sapiens arylsulfatase E precurs... 32 2.0
AK223183-1|BAD96903.1| 589|Homo sapiens arylsulfatase E precurs... 32 2.0
AB076348-1|BAD01535.1| 255|Homo sapiens keratin associated prot... 32 2.7
M16505-1|AAA60596.1| 583|Homo sapiens STS protein. 30 8.2
J04964-1|AAA60597.1| 583|Homo sapiens STS protein. 30 8.2
BC075030-1|AAH75030.1| 583|Homo sapiens steroid sulfatase (micr... 30 8.2
>X83573-1|CAA58556.1| 589|Homo sapiens ARSE protein.
Length = 589
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 198 KHT*FFKYLYFLHLHTQLVSSKNSKGEHIHG 106
KH F ++ FLH+H L++ +N G+ +HG
Sbjct: 287 KHGPFLLFVSFLHVHIPLITMENFLGKSLHG 317
>BC130438-1|AAI30439.1| 589|Homo sapiens arylsulfatase E
(chondrodysplasia punctata 1) protein.
Length = 589
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 198 KHT*FFKYLYFLHLHTQLVSSKNSKGEHIHG 106
KH F ++ FLH+H L++ +N G+ +HG
Sbjct: 287 KHGPFLLFVSFLHVHIPLITMENFLGKSLHG 317
>AK223199-1|BAD96919.1| 589|Homo sapiens arylsulfatase E precursor
variant protein.
Length = 589
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 198 KHT*FFKYLYFLHLHTQLVSSKNSKGEHIHG 106
KH F ++ FLH+H L++ +N G+ +HG
Sbjct: 287 KHGPFLLFVSFLHVHIPLITMENFLGKSLHG 317
>AK223183-1|BAD96903.1| 589|Homo sapiens arylsulfatase E precursor
variant protein.
Length = 589
Score = 32.3 bits (70), Expect = 2.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 198 KHT*FFKYLYFLHLHTQLVSSKNSKGEHIHG 106
KH F ++ FLH+H L++ +N G+ +HG
Sbjct: 287 KHGPFLLFVSFLHVHIPLITMENFLGKSLHG 317
>AB076348-1|BAD01535.1| 255|Homo sapiens keratin associated protein
protein.
Length = 255
Score = 31.9 bits (69), Expect = 2.7
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 719 SVCCVFYCCRWSDEITIRSRCQVATSTSHCC 627
S+CCV C S +S CQ A TS CC
Sbjct: 195 SICCVPVCSGASSPCCQQSSCQPACCTSSCC 225
>M16505-1|AAA60596.1| 583|Homo sapiens STS protein.
Length = 583
Score = 30.3 bits (65), Expect = 8.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 192 T*FFKYLYFLHLHTQLVSSKNSKGEHIHG 106
T F L +LH+HT L SSK+ G+ HG
Sbjct: 278 TPFLLVLSYLHVHTALFSSKDFAGKSQHG 306
>J04964-1|AAA60597.1| 583|Homo sapiens STS protein.
Length = 583
Score = 30.3 bits (65), Expect = 8.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 192 T*FFKYLYFLHLHTQLVSSKNSKGEHIHG 106
T F L +LH+HT L SSK+ G+ HG
Sbjct: 278 TPFLLVLSYLHVHTALFSSKDFAGKSQHG 306
>BC075030-1|AAH75030.1| 583|Homo sapiens steroid sulfatase
(microsomal), isozyme S protein.
Length = 583
Score = 30.3 bits (65), Expect = 8.2
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 192 T*FFKYLYFLHLHTQLVSSKNSKGEHIHG 106
T F L +LH+HT L SSK+ G+ HG
Sbjct: 278 TPFLLVLSYLHVHTALFSSKDFAGKSQHG 306
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,474,396
Number of Sequences: 237096
Number of extensions: 2133400
Number of successful extensions: 7901
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7901
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -