Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0155
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    30   2.2  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    30   2.2  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    30   2.2  
U50191-8|AAK31551.3|  296|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 570  ANRSVNEYSLCRLDVLPSHTTM*STGSHLASRTDRNLVTPPTAVKNTTH 716
            AN +  E + C +DV+  H  +  TG H+    D+N V     V++  H
Sbjct: 3972 ANEAGCESTSCTIDVVDDHLGLQQTGLHVMCERDQNDVELDILVQSPNH 4020


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 570  ANRSVNEYSLCRLDVLPSHTTM*STGSHLASRTDRNLVTPPTAVKNTTH 716
            AN +  E + C +DV+  H  +  TG H+    D+N V     V++  H
Sbjct: 3972 ANEAGCESTSCTIDVVDDHLGLQQTGLHVMCERDQNDVELDILVQSPNH 4020


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 570  ANRSVNEYSLCRLDVLPSHTTM*STGSHLASRTDRNLVTPPTAVKNTTH 716
            AN +  E + C +DV+  H  +  TG H+    D+N V     V++  H
Sbjct: 3972 ANEAGCESTSCTIDVVDDHLGLQQTGLHVMCERDQNDVELDILVQSPNH 4020


>U50191-8|AAK31551.3|  296|Caenorhabditis elegans Hypothetical
           protein T14B4.3 protein.
          Length = 296

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 22/69 (31%), Positives = 29/69 (42%)
 Frame = +3

Query: 573 NRSVNEYSLCRLDVLPSHTTM*STGSHLASRTDRNLVTPPTAVKNTTH*RIPNPIKTHNN 752
           N +V +Y    LDV  + T M      LA    R + T   A+KN+    +   I TH  
Sbjct: 165 NANVVDYYRVHLDVSNARTDM--ERKQLAENIKRGIDTLQDAIKNSYGGNVVAEIYTHEK 222

Query: 753 FDNDLHVRI 779
            D D   RI
Sbjct: 223 PDRDEKARI 231


>U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical
           protein K02F3.6 protein.
          Length = 404

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +1

Query: 196 FLYPIG*KYIRNILNIKKRKVLEVSHNPTLI 288
           F YPI   Y RNI N KK++   V   PTLI
Sbjct: 320 FKYPIN--YYRNIFNAKKQQADLVLEMPTLI 348


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,073,911
Number of Sequences: 27780
Number of extensions: 368514
Number of successful extensions: 801
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)