Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0154
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   3.7  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.5  

>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 224 FHERRAYVGATAPC 183
           FHER   +  +APC
Sbjct: 84  FHEREPCIAGSAPC 97


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 440 VRFLFPLFLYCR 405
           +RFL P+F  CR
Sbjct: 8   IRFLRPIFAVCR 19


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +3

Query: 249 QDQQMNILKAFYVDLLVPLETNLEKDTKVVQSEQKRFLQQHK 374
           QD  MNI    +V L      N+     V   E   FLQ+H+
Sbjct: 440 QDGVMNINGVLFVFLTNMTFQNVFAVINVFSGELPVFLQEHR 481


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +3

Query: 249 QDQQMNILKAFYVDLLVPLETNLEKDTKVVQSEQKRFLQQHK 374
           QD  MNI    +V L      N+     V   E   FLQ+H+
Sbjct: 440 QDGVMNINGVLFVFLTNMTFQNVFAVINVFSGELPVFLQEHR 481


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,140
Number of Sequences: 336
Number of extensions: 2928
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)