Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0154
         (629 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_9364| Best HMM Match : No HMM Matches (HMM E-Value=.)               35   0.063
SB_46953| Best HMM Match : DUF1014 (HMM E-Value=0.83)                  32   0.33 
SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_48351| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_11167| Best HMM Match : Mucin (HMM E-Value=4.9)                     29   4.1  
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)                  27   9.5  
SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45)              27   9.5  

>SB_9364| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 201

 Score = 34.7 bits (76), Expect = 0.063
 Identities = 22/90 (24%), Positives = 42/90 (46%)
 Frame = +3

Query: 3   EELTKLVDGIYKNILDKFNPGARQMITXXXXXXXXXXXXXXXSRLYVDAVGKLGRQAQQG 182
           EEL   + G Y+NILD  +P  +++                 S  +  A+ KL + A   
Sbjct: 92  EELHSTICGTYQNILD-LSPVLKEVAAASKQYYKSLQNVSSSSLAFQQALAKLSQMASSS 150

Query: 183 TWGGCADIGTALMKVVEVYREIQDQQMNIL 272
             G    +G AL ++V  +R+++ ++ +I+
Sbjct: 151 K-GPAKPLGLALEEIVTTHRDVEARRADIV 179


>SB_46953| Best HMM Match : DUF1014 (HMM E-Value=0.83)
          Length = 284

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 16/58 (27%), Positives = 32/58 (55%)
 Frame = +3

Query: 201 DIGTALMKVVEVYREIQDQQMNILKAFYVDLLVPLETNLEKDTKVVQSEQKRFLQQHK 374
           DIG +L K+V  ++ I  Q   ++   Y  L+ PL++NL++  + V    +   +++K
Sbjct: 5   DIGQSLTKMVMRHKSIDGQLKALIGLLYDSLISPLQSNLDEWKRGVSQLDRDHAKEYK 62


>SB_33387| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 888

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 5/142 (3%)
 Frame = +3

Query: 210 TALMKVVEVYREIQDQQMNILKAFYVDLLVPLETNLEKDTKVVQSEQKRFLQQHKLRSES 389
           T   K+ E    + + Q N+  +    L    E  +EKD ++ + E K  L Q   + ++
Sbjct: 322 TITAKLTEATNRVSELQ-NMFTSMETQLQKSQERQVEKDNQIKELELKLKLAQEDSK-QN 379

Query: 390 YSXXXXXXXXXXXXXXXXXXVGSAMDKEM---KNMQI--LEEEKTKLDAFCEQSLKNAMT 554
           +S                  V   +  E+   K   I  L EE +K D     ++KN + 
Sbjct: 380 HSPVNNHVEASENGQVKSPAVSLQIHNELLQEKETAINKLNEELSKRDQEII-NMKNLVD 438

Query: 555 QERRRYGFVLERQCSLAKHWLA 620
           QE+++   V E Q    K+W A
Sbjct: 439 QEKKKNNCVFETQDLRMKNWKA 460


>SB_48351| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 969

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +2

Query: 392 QQGCC-DNKETEEKENERDQSGFCYG*RNEEYANFGRRENKTGCVLRTKLKE 544
           +QGC  + K  +    ER     C G R  +    G R++K GC+ + K K+
Sbjct: 448 KQGCIRERKGKQGCIRERKGKQGCIGERKGKQGCIGERKSKQGCIGKCKSKQ 499


>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2408

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 503  LFFQNLHILHFF-IHSRTHFGHVRFLFPLFLYCRSSLAVALRTQF 372
            LF   LH+  FF +H R  F  +      +LYCR +L   +  ++
Sbjct: 932  LFCDRLHLFQFFLVHLRLFFTFIIKQIEGWLYCRQTLTTQISYKY 976


>SB_11167| Best HMM Match : Mucin (HMM E-Value=4.9)
          Length = 297

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -3

Query: 162 PASPLRPRRDETPPPHHVELLNMPFQQLSSAGHPD*TCPGY 40
           P + L P   + PPP+H   LN P  Q  S   P    P Y
Sbjct: 174 PLADLAPYPPDAPPPYHTVALNKPSLQPYSQMPPVEQTPPY 214


>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
          Length = 766

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +3

Query: 459 AMDKEMKNMQILEEEKTKLDAFCEQSLKNAMTQER 563
           AM+KEMK + + EE+ TK++   +Q   +A+ +ER
Sbjct: 369 AMEKEMKGLGLKEEDATKVEVAEDQ--PDAVIKER 401


>SB_37029| Best HMM Match : 7tm_1 (HMM E-Value=4.2039e-45)
          Length = 1102

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 309 FPREPVDLRRTPSICSFVDLVFPCTLRRLS*APCLCRRNRPMF 181
           F RE   ++RTP  CS     F C+++R   AP  C   R  F
Sbjct: 292 FRREYTSIKRTPFGCSIKRTPFGCSIKR---APFGCSIKRTPF 331


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,066,433
Number of Sequences: 59808
Number of extensions: 372973
Number of successful extensions: 1093
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)