Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0154
         (629 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    26   1.1  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   2.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.5  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   8.0  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   8.0  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +3

Query: 492 LEEEKTKLDAFCEQSLKNAMTQERRRYGFVLERQCSLAK 608
           ++EEK K +  C   ++  + Q+RR+    LER  + ++
Sbjct: 690 VDEEKVKFERSCRTIIEQLLDQQRRKVA-ALERYAAASR 727


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = +2

Query: 164  QAGATRNMGRLR-RHRHGAHESRRSVQGNTRSTNEHIEGVLRRSTGSLGN*SRERYKSSA 340
            +A     M RLR RHR    + RR V+G      E +   L  S  +         K++A
Sbjct: 1087 RANIRARMARLRQRHRQHQQDERRGVEGGDIERGESVYPELASSPNNRQGGLTSAEKAAA 1146

Query: 341  V 343
            V
Sbjct: 1147 V 1147


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = +3

Query: 456  SAMDKEMKNMQILEEEKTKLDAFCEQSLKNAMTQERRRYGFVLERQ 593
            S +++  +N  + +  K  +D FC         +ER +     ERQ
Sbjct: 1424 SIIERSRQNDMLYQSSKNAVDGFCYSPSDRQCAEEREQAEQRFERQ 1469


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 93  PFQQLSSAGHPD*TC 49
           PF+ +++A HP+ TC
Sbjct: 389 PFRNVATANHPNATC 403


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +2

Query: 185 MGRLRRHRHGA 217
           +GRL R+RHGA
Sbjct: 355 LGRLERYRHGA 365


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,936
Number of Sequences: 2352
Number of extensions: 10991
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)