Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0154
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016677-4|AAL11109.2| 304|Caenorhabditis elegans Hypothetical ... 31 0.90
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical pr... 29 3.6
AY394006-1|AAQ96373.1| 377|Caenorhabditis elegans endophilin pr... 28 6.3
AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated... 28 6.3
AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated... 28 6.3
AF003739-5|AAK84629.2| 422|Caenorhabditis elegans Temporarily a... 28 6.3
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 27 8.4
U42839-3|AAC69014.1| 152|Caenorhabditis elegans Hypothetical pr... 27 8.4
>AF016677-4|AAL11109.2| 304|Caenorhabditis elegans Hypothetical
protein ZK1240.3 protein.
Length = 304
Score = 30.7 bits (66), Expect = 0.90
Identities = 13/60 (21%), Positives = 34/60 (56%)
Frame = +3
Query: 204 IGTALMKVVEVYREIQDQQMNILKAFYVDLLVPLETNLEKDTKVVQSEQKRFLQQHKLRS 383
+G + +++R + DQ+ I++ + E NLEK+ K++QS+++ + ++++
Sbjct: 183 VGKVNLHFKKLHRLLSDQEEAIIEKLELSSSKTYELNLEKENKLLQSQEELAKKMERMKT 242
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical
protein W05B2.4 protein.
Length = 2265
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 445 PKWVLLWIKK*RICKFWKKRKQNWMRSAN 531
P+W+ + +I K W + +Q WMR AN
Sbjct: 818 PQWIEWTARAEKILKAWCETQQKWMRVAN 846
>Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical
protein K11E4.4 protein.
Length = 825
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +3
Query: 243 EIQDQQMNILKAFYV--DLLVPLETNLEKDTKVVQSEQK-RFLQQHKL 377
E+ Q+ +I+ A Y D L L+T +K KVV+SEQK R +H L
Sbjct: 753 EVVLQEKSIVDAVYAIKDQLSFLQTEFQKLAKVVESEQKARRRLEHNL 800
>AY394006-1|AAQ96373.1| 377|Caenorhabditis elegans endophilin
protein.
Length = 377
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +3
Query: 135 LYVDAVGKLGRQAQQGTWGGCADIGTALMKVVEVYREIQD---QQMNILKAFYVDLLVPL 305
+ D + K G+Q G +D+G +L E YR++ D Q + +K ++D L L
Sbjct: 92 MLADVMQKYGQQL-----GDNSDLGKSLNDAAETYRQMADIKYQMEDNVKQNFLDPLTHL 146
Query: 306 ETNLEKD 326
+ N KD
Sbjct: 147 QNNELKD 153
>AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated
protein 57, isoform a protein.
Length = 377
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +3
Query: 135 LYVDAVGKLGRQAQQGTWGGCADIGTALMKVVEVYREIQD---QQMNILKAFYVDLLVPL 305
+ D + K G+Q G +D+G +L E YR++ D Q + +K ++D L L
Sbjct: 92 MLADVMQKYGQQL-----GDNSDLGKSLNDAAETYRQMADIKYQMEDNVKQNFLDPLTHL 146
Query: 306 ETNLEKD 326
+ N KD
Sbjct: 147 QNNELKD 153
>AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated
protein 57, isoform c protein.
Length = 379
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +3
Query: 135 LYVDAVGKLGRQAQQGTWGGCADIGTALMKVVEVYREIQD---QQMNILKAFYVDLLVPL 305
+ D + K G+Q G +D+G +L E YR++ D Q + +K ++D L L
Sbjct: 92 MLADVMQKYGQQL-----GDNSDLGKSLNDAAETYRQMADIKYQMEDNVKQNFLDPLTHL 146
Query: 306 ETNLEKD 326
+ N KD
Sbjct: 147 QNNELKD 153
>AF003739-5|AAK84629.2| 422|Caenorhabditis elegans Temporarily
assigned gene nameprotein 96 protein.
Length = 422
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 132 RLYVDAVGKLGRQAQQGTWGGCADIGTALMKVVEVYREI 248
RLY+D G LG + WGGCA + A V V E+
Sbjct: 368 RLYLDH-GALGARLTGAGWGGCAVVLMAADDVDRVVAEL 405
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -3
Query: 159 ASPLRPRRDETPPPHHVELLNMPFQQLSSAGHPD 58
A+P + PPP ++ NMP Q HP+
Sbjct: 1116 AAPATIGMPQPPPPSQIQQQNMPMQHQQMQQHPN 1149
>U42839-3|AAC69014.1| 152|Caenorhabditis elegans Hypothetical
protein F11C7.2 protein.
Length = 152
Score = 27.5 bits (58), Expect = 8.4
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 130 LVSTWTQWGSWA 165
L TWT WG+WA
Sbjct: 16 LAGTWTDWGAWA 27
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,089,174
Number of Sequences: 27780
Number of extensions: 286295
Number of successful extensions: 982
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -