Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0154
         (629 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.80 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.80 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.3  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   7.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   9.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 41  YPGQVQSGCPADDNCWKGIFKSSTW 115
           +PG++ +G       W G+F  S W
Sbjct: 149 HPGKIVNGKRVPPTNWVGVFGGSAW 173


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 41  YPGQVQSGCPADDNCWKGIFKSSTW 115
           +PG++ +G       W G+F  S W
Sbjct: 149 HPGKIVNGKRVPPTNWVGVFGGSAW 173


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 503  ENKTGCVLRTKLKECYDPRASPLRL 577
            E++T C+L     + +D +  PLRL
Sbjct: 1439 EDETSCMLDKTRAQTFDGKDYPLRL 1463


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 489 ILEEEKTKLDAFCEQSLKNAM 551
           +LE  KTKL    +  L+N M
Sbjct: 663 VLERPKTKLTGINDARLRNTM 683


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = +2

Query: 314 SRERYKSSAVGTKEILTATQIAF*ELQQGCCDNKETEEKENERDQS 451
           +R  +K+   G K   T        +QQ     +ET++K+++   +
Sbjct: 50  ARPSFKTFDKGPKNYTTPVNFVAGGIQQAGKPKEETDDKDDDESDN 95


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 443 HVRF--LFPLFLYCRSSLAVALRTQFVLL*ESLLFRLHYFCI 324
           HV F   F    + ++SLA+    + + +  S+LF +  FCI
Sbjct: 175 HVTFKLTFDNRAFTQASLAMTREEKHLPIGASVLFEIFPFCI 216


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,825
Number of Sequences: 438
Number of extensions: 4037
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)