Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0153
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    27   0.21 
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   1.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.0  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = -2

Query: 138 LIFCSYLLHS*VFITTQ*GVVVIIWVSLIIQYFVYASHCND 16
           LI+ SY   + +FIT +   V+++W+S  + + +   HCN+
Sbjct: 122 LIWKSYK-RTQIFITCELFFVILLWISFFLNFML---HCNN 158


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +2

Query: 599 LCS**IVADSSKKYLRNLAVTSCHYNCQIL 688
           LC   + ++SSK      +V+S  YNC++L
Sbjct: 213 LCGASVHSESSKVLPLLFSVSSSSYNCEVL 242


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 616 CSGFFKKVLKKPGCY 660
           C GFFK+ ++K   Y
Sbjct: 106 CKGFFKRTVRKDLSY 120


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 623  PLQSTKSIIHEKLIMLHLTII 561
            P+  T +   EK++ LHL  I
Sbjct: 978  PIDYTSAFSSEKIVWLHLVYI 998


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,510
Number of Sequences: 336
Number of extensions: 3465
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)