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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0153
         (751 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo...    72   8e-14
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch...    62   1e-10
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p...    62   1e-10
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom...    60   3e-10
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom...    60   3e-10
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos...    60   3e-10
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom...    55   1e-08
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar...    54   3e-08
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom...    53   4e-08
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ...    53   4e-08
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces...    53   5e-08
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz...    52   7e-08
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha...    52   1e-07
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2...    51   2e-07
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3...    50   3e-07
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc...    49   8e-07
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc...    41   2e-04
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ...    37   0.004
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom...    36   0.008
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce...    31   0.23 
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb...    29   0.54 
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc...    29   0.71 
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy...    27   3.8  
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc...    27   3.8  
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||...    26   6.6  
SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1 |Schizosacch...    25   8.7  

>SPBC1773.09c |mug184||meiotically upregulated gene
           Mug184|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 551

 Score = 72.1 bits (169), Expect = 8e-14
 Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
 Frame = +1

Query: 73  DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMK-FQKLKEAKEILCDPSKR 249
           DYYA+L   +N+T +QI  +Y  LALQ+HPD+N G++E  +K FQ+L+ A E+L D +KR
Sbjct: 12  DYYAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKR 71

Query: 250 ALYDK 264
            +YD+
Sbjct: 72  LIYDQ 76


>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 476

 Score = 61.7 bits (143), Expect = 1e-10
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = +1

Query: 46  LNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKE 225
           L  +++   D+Y +LG  + +T  +I   Y+ LAL +HPDKN G  EAE +F+++ EA  
Sbjct: 340 LELKKSKRKDHYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYT 399

Query: 226 ILCDPSKRALYD 261
           IL DP  R  +D
Sbjct: 400 ILSDPESRRRFD 411


>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 355

 Score = 61.7 bits (143), Expect = 1e-10
 Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +1

Query: 55  QRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKN-DGEKEAEMKFQKLKEAKEIL 231
           QR  D DYY +L    ++  + I   Y+ LA+ +HPDKN +  + A  KFQKL EA ++L
Sbjct: 3   QRVVDRDYYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVL 62

Query: 232 CDPSKRALYDKWRRSG 279
            DP  R  YDK  + G
Sbjct: 63  SDPKLREKYDKLGKVG 78


>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 381

 Score = 60.5 bits (140), Expect = 3e-10
 Identities = 25/66 (37%), Positives = 42/66 (63%)
 Frame = +1

Query: 85  LLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDK 264
           +LG  ++++  +I   Y+ L  Q HPDKN G +EA+ KF ++ +A E+L DP +R +YD 
Sbjct: 11  ILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYDA 70

Query: 265 WRRSGI 282
           +   G+
Sbjct: 71  YGEEGL 76


>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
           type|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 392

 Score = 60.1 bits (139), Expect = 3e-10
 Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
 Frame = +1

Query: 67  DDDYYALLGCDENSTVEQITAEYKILALQHHPDKN-DGEKEAEMKFQKLKEAKEILCDPS 243
           D +YY LLG   ++T   I   Y+ LA+++HPDKN D  + A  KFQK+ EA ++L D  
Sbjct: 6   DTEYYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEK 65

Query: 244 KRALYDKW 267
            R+ YD++
Sbjct: 66  LRSQYDQF 73


>SPBC11B10.05c |rsp1||random septum position protein
           Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 494

 Score = 60.1 bits (139), Expect = 3e-10
 Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +1

Query: 73  DYYALLGCDENSTVEQITAEYKILALQHHPDKNDG-EKEAEMKFQKLKEAKEILCDPSKR 249
           DYY +LG +  S+  +I  +Y  L L++HPD+N G E E   +FQ +++A E+L DP  R
Sbjct: 12  DYYTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLR 71

Query: 250 ALYDKWR 270
            L+D+ R
Sbjct: 72  ELFDQRR 78


>SPCC63.03 |||DNAJ domain protein, DNAJC11
           family|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 642

 Score = 54.8 bits (126), Expect = 1e-08
 Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = +1

Query: 73  DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEA--EMKFQKLKEAKEILCDPSK 246
           + Y  LG  +++T +QI   Y  L+   HPD++  +++A  E KFQ ++ A E+L DPSK
Sbjct: 8   ELYLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSK 67

Query: 247 RALYDKWRRSGI 282
           + +YD +   G+
Sbjct: 68  KEIYDNFGEQGL 79


>SPAC1071.09c |||DNAJ domain protein, DNAJC9
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 282

 Score = 53.6 bits (123), Expect = 3e-08
 Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
 Frame = +1

Query: 67  DDDYYALLGCDENSTVEQITAEYKILALQHHPDK-NDGEK--EAEMKFQKLKEAKEILCD 237
           D D Y++LG +++++ E I   Y+  ALQHHPD+ +D EK  EA ++F K+  A  +L D
Sbjct: 29  DIDPYSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSD 88

Query: 238 PSKRALYDKWRR-----SGIAMGFKQWL 306
             +R  YDK  +     + I   +K+WL
Sbjct: 89  KKRRKHYDKTGQLRETDADIDFDWKEWL 116


>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 407

 Score = 53.2 bits (122), Expect = 4e-08
 Identities = 26/71 (36%), Positives = 41/71 (57%)
 Frame = +1

Query: 79  YALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALY 258
           Y +L  D  ++  ++   Y+ LAL++HPDKN    +   KF+++  A EIL D  KRA Y
Sbjct: 8   YEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGD---KFKEISRAYEILADEEKRATY 64

Query: 259 DKWRRSGIAMG 291
           D++   G+  G
Sbjct: 65  DRFGEEGLQGG 75


>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 528

 Score = 53.2 bits (122), Expect = 4e-08
 Identities = 25/65 (38%), Positives = 41/65 (63%)
 Frame = +1

Query: 73  DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 252
           D Y  LG  ++++  +I + Y  LA Q+HPD N  +K A+ KF ++K+A E+L DP K+ 
Sbjct: 86  DPYKTLGVSKSASASEIKSAYYKLAKQYHPDANP-DKAAQDKFVEIKQAYEVLQDPKKKK 144

Query: 253 LYDKW 267
            +D +
Sbjct: 145 AFDTY 149


>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 403

 Score = 52.8 bits (121), Expect = 5e-08
 Identities = 29/77 (37%), Positives = 44/77 (57%)
 Frame = +1

Query: 34  VDEILNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLK 213
           V +I+ Y+ +    YY +L   +  T  +I   YK LALQ HPDKN     A+  F+ + 
Sbjct: 103 VQKIIKYKNH---QYYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHA-PSADEAFKMVS 158

Query: 214 EAKEILCDPSKRALYDK 264
           +A ++L DP+ RA YD+
Sbjct: 159 KAFQVLSDPNLRAHYDR 175


>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
           Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 289

 Score = 52.4 bits (120), Expect = 7e-08
 Identities = 26/71 (36%), Positives = 41/71 (57%)
 Frame = +1

Query: 73  DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 252
           DYY LLG +E++  ++I   ++  +L++HPDKN  + +A  KF  L+ A   L D   R 
Sbjct: 9   DYYELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRK 68

Query: 253 LYDKWRRSGIA 285
            YD  R + +A
Sbjct: 69  AYDSERFAKLA 79


>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 380

 Score = 51.6 bits (118), Expect = 1e-07
 Identities = 24/66 (36%), Positives = 40/66 (60%)
 Frame = +1

Query: 67  DDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSK 246
           D D Y +L  + +S +++I A Y+ LALQ+HPD+N G ++    F ++  A  IL +  K
Sbjct: 7   DMDCYEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDDK 66

Query: 247 RALYDK 264
           R  ++K
Sbjct: 67  RKWHEK 72


>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 413

 Score = 51.2 bits (117), Expect = 2e-07
 Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
 Frame = +1

Query: 67  DDDYYALLGCDENSTVEQITAEYKILALQHHPDKN--DGEKEAEMKFQKLKEAKEILCDP 240
           D   Y +L     ++ E+I   YK LAL HHPDK     ++EA  +F+ ++EA +IL DP
Sbjct: 4   DTKLYDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDILKDP 63

Query: 241 SKRALYDKW 267
             R +YD +
Sbjct: 64  ESREMYDMY 72


>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 208

 Score = 50.4 bits (115), Expect = 3e-07
 Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
 Frame = +1

Query: 73  DYYALLGCDENSTVEQITAEYKILALQHHPDK--NDGEKEAEMKFQKLKEAKEILCDPSK 246
           DYYA+L     ++ E+I   YK  AL+ HPD+        A  +FQ + EA  +L D S+
Sbjct: 4   DYYAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSR 63

Query: 247 RALYDKWRRSGIA 285
           RA YD+   S  A
Sbjct: 64  RAQYDRESASSSA 76


>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 379

 Score = 48.8 bits (111), Expect = 8e-07
 Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = +1

Query: 67  DDDYYALLGCDENSTVEQITAEYKILALQHHPDKN-DGEKEAEMKFQKLKEAKEILCDPS 243
           D   Y  L     ++  ++   Y+ LAL++HPDKN +GEK    KF+++  A E+L DP 
Sbjct: 4   DTKLYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEK----KFKEISLAYEVLSDPQ 59

Query: 244 KRALYDKW 267
           +R LYD++
Sbjct: 60  RRKLYDQY 67


>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 442

 Score = 41.1 bits (92), Expect = 2e-04
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
 Frame = +1

Query: 73  DYYALLGCDE---NSTVEQITAEYKILALQHHPDKN--DGEKEAEMKFQKLKEAKEILCD 237
           D+YA+LG  +    +  EQI   +    L+HHPDK    G    +  F+ +++A EIL D
Sbjct: 97  DHYAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEILSD 156

Query: 238 PSKRALYD 261
           P +R  +D
Sbjct: 157 PVRRRQFD 164


>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
           Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 611

 Score = 36.7 bits (81), Expect = 0.004
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
 Frame = +1

Query: 73  DYYALLGCDENSTVEQITAEYKILALQHHPDK-----NDGEKEAEMKFQKLKEAKEILCD 237
           D Y +LG  + ++V+ +   YK L+++ HPDK     N   +E E  + ++  A   L D
Sbjct: 98  DPYEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTD 157

Query: 238 PSKRALY 258
              R  Y
Sbjct: 158 DKTRENY 164


>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 303

 Score = 35.5 bits (78), Expect = 0.008
 Identities = 25/92 (27%), Positives = 44/92 (47%)
 Frame = +1

Query: 34  VDEILNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLK 213
           VD + +  +N    +Y LL     +++++I   Y+  ++ +HPDKN   KE    +  L 
Sbjct: 28  VDSLKSILKNKAT-FYELLEVPTKASIKEINRAYRKKSILYHPDKNPKSKEL---YTLLG 83

Query: 214 EAKEILCDPSKRALYDKWRRSGIAMGFKQWLG 309
               IL +   R  YD + ++    GF +W G
Sbjct: 84  LIVNILRNTETRKRYDYFLKN----GFPRWKG 111


>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1008

 Score = 30.7 bits (66), Expect = 0.23
 Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +1

Query: 229 LCDPSKRALYDKWRRSGIAMGFKQW--LGMKDHVQQSMHWSKPNTKDR 366
           LC   +  + +KWR+ G  +G  +W   G +++V+    + +P+  +R
Sbjct: 840 LCKSRRLGILEKWRKMGSKIGTSEWDLKGGEEYVELMQQYVRPSLTNR 887


>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 209

 Score = 29.5 bits (63), Expect = 0.54
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +1

Query: 79  YALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALY 258
           Y +L      +V+ I   Y+  +L  HPDKN    +A   F  LK+A+  L +   R   
Sbjct: 33  YDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESL 92

Query: 259 D 261
           D
Sbjct: 93  D 93


>SPAC926.05c |||diphthamide biosynthesis protein Dph4
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 139

 Score = 29.1 bits (62), Expect = 0.71
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 73  DYYALLGCDENSTV--EQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSK 246
           ++Y++L   +  T   ++I   Y+   L  HPDK   +        ++KEA ++L     
Sbjct: 2   NHYSVLNLKDGKTYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKD 61

Query: 247 RALY 258
           R  Y
Sbjct: 62  RQQY 65


>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 542

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 354 IRLGPVHGLLHMIFHTQPLLEAHSYTTTTPL 262
           I L P H  L+++ +  P L   SYT  T L
Sbjct: 427 ITLAPQHSFLNIVINLNPALALKSYTIITLL 457


>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 270

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 13/76 (17%)
 Frame = +1

Query: 79  YALLGCDENSTVEQITAEYKILALQHHPDKNDG-------------EKEAEMKFQKLKEA 219
           Y +L      T   I  +Y  L  +HHPDK                 K  E  F+ L  A
Sbjct: 34  YEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLLLAA 93

Query: 220 KEILCDPSKRALYDKW 267
             +L D  +R  YD++
Sbjct: 94  NALLSDKRRREEYDRF 109


>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1158

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 326 SSPCTGPSLILRIACWKEMEASRQVHLALAPV 421
           SS C+   L   I+C + +E   ++HL + PV
Sbjct: 379 SSTCSRNRLCYSISCPRRLEQQARLHLKVQPV 410


>SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 630

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 317 IMCSSPCTGPSLILRIACWKEMEAS 391
           I C SPC+G +LIL +    +++ S
Sbjct: 334 ITCGSPCSGEALILGLNVLSKVDLS 358


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,957,885
Number of Sequences: 5004
Number of extensions: 56857
Number of successful extensions: 159
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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