Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0153
(751 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 25 0.76
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 9.3
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 9.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.3
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 9.3
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 9.3
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 9.3
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.3
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 21 9.3
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 21 9.3
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 25.0 bits (52), Expect = 0.76
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 163 DKNDGEKEAEMKFQKLKEAKEILCDP-SKRALYDKW 267
+KN G + MK +K + A+E + DP + YD++
Sbjct: 145 EKNAGNNKITMKSKKEQNAEEDIVDPVEENETYDEF 180
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 461 SGDAGELAIKNHPLRSSPSFATMKSKC 541
SG+AG +K+ LRS P+F+ S+C
Sbjct: 456 SGEAGIEEVKSPVLRSPPAFS--HSRC 480
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 461 SGDAGELAIKNHPLRSSPSFATMKSKC 541
SG+AG +K+ LRS P+F+ S+C
Sbjct: 456 SGEAGIEEVKSPVLRSPPAFS--HSRC 480
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 749 NHNNYSILLNNETRNN 702
N+NNY+ NN NN
Sbjct: 93 NYNNYNNNYNNNYNNN 108
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 749 NHNNYSILLNNETRNN 702
N+NNY+ NN NN
Sbjct: 93 NYNNYNNNYNNNYNNN 108
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 749 NHNNYSILLNNETRNN 702
N+NNY NN NN
Sbjct: 92 NNNNYKYNYNNNNYNN 107
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 749 NHNNYSILLNNETRNN 702
N+NNY NN NN
Sbjct: 92 NNNNYKYNYNNNNYNN 107
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 749 NHNNYSILLNNETRNN 702
N+NNY NN NN
Sbjct: 92 NNNNYKYNYNNNNYNN 107
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 749 NHNNYSILLNNETRNN 702
N+NNY NN NN
Sbjct: 92 NNNNYKYNYNNNNYNN 107
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -3
Query: 749 NHNNYSILLNNETRNN 702
N+NNY NN NN
Sbjct: 325 NNNNYKYNYNNNNYNN 340
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 616 CSGFFKKVLKKPGCY 660
C GFFK+ ++K Y
Sbjct: 130 CKGFFKRTVRKDLSY 144
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 616 CSGFFKKVLKKPGCY 660
C GFFK+ ++K Y
Sbjct: 130 CKGFFKRTVRKDLSY 144
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,233
Number of Sequences: 438
Number of extensions: 4000
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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