Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0149
(792 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 35 0.015
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 34 0.020
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 31 0.25
SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces ... 30 0.33
SPAC24B11.14 ||SPAC806.10|sequence orphan|Schizosaccharomyces po... 29 0.58
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 29 0.76
SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase Srk1|Schizo... 28 1.8
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp... 27 2.3
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 27 4.1
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 27 4.1
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 27 4.1
SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual 27 4.1
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 26 5.4
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 26 5.4
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 26 5.4
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 26 7.1
SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe... 26 7.1
SPBC3E7.16c |leu3|SPBC4F6.03c|2-isopropylmalate synthase|Schizos... 25 9.4
SPCC622.21 |wtf12||wtf element Wtf12|Schizosaccharomyces pombe|c... 25 9.4
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 25 9.4
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 34.7 bits (76), Expect = 0.015
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Frame = +2
Query: 428 IVRHNNTSRKHSPVTTAASPMKTT--DSTILSYTNKRTTQLHN-----RD-ISLNNSTKL 583
+ R N +H+ +T +P ++T DS + S++ + + RD +++ N +
Sbjct: 30 VCRDNIALSEHNVITVLDTPQRSTQCDSLLKSFSTPLVSGSEDVLPSPRDALNITNKKSV 89
Query: 584 SHNIKPSLSRNTNHNLNTSLNPSPGIN-LNLSTNLP 688
+ N+ SL+ ++N + NT+LNPS + +NL+++ P
Sbjct: 90 TDNLLLSLT-SSNQSTNTNLNPSSRVEIINLNSSPP 124
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 34.3 bits (75), Expect = 0.020
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = +2
Query: 410 ITRHHNIVRHNNTSRKHS--PVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKL 583
IT IV S S P TA+S + T+S+ L+ T+ + +R IS +++ +
Sbjct: 754 ITSSSAIVSSTTVSNISSNLPSATASSQSQLTNSSTLA-TSLYLSSSSSRTISTSSTNEY 812
Query: 584 SHNIK-PSLSRNTNHNLNTSLNPSPGINLNLSTNL 685
+ + P++S T+ + TSL + G+N N T+L
Sbjct: 813 NTSFHAPTVSSTTSSSSTTSLAANKGVNSNSITSL 847
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 30.7 bits (66), Expect = 0.25
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 172 GAFGAAYQQEDGINFKEETDAEGNRKGSYSYIDPSGQRKTVNYI 303
G+F Q G+NF E+T + N + ++S D GQR+ VN +
Sbjct: 33 GSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNML 76
>SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 30.3 bits (65), Expect = 0.33
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +1
Query: 376 GYTPDP---RYNSPDYKAPQYSAPQQYVSQAQPRNYGGKP 486
GY P P Y P+Y PQ + PQQ + Q GG P
Sbjct: 11 GYAPAPPQQAYGGPNYYPPQQNYPQQGYAPPQGYPQGGYP 50
>SPAC24B11.14 ||SPAC806.10|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 166
Score = 29.5 bits (63), Expect = 0.58
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 442 VVAHYIVVPCNLESCIEDRACSQE*ERQLEAQSECDRQRLGIHFC 308
V AH+ +VP S + C+Q+ ER++ + +L FC
Sbjct: 118 VFAHFDIVPYTTYSILTKYRCAQDKEREIVGLINASQSKLRYKFC 162
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.1 bits (62), Expect = 0.76
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +2
Query: 518 YTNKRTTQLHNRDISLNNSTKLSH----NIKPSLSRNTNHNLNTSLNPSPGINLNLSTNL 685
+TN + + + NNS + S+ N++PS + H N S+NP N++ +
Sbjct: 78 HTNANSRRNAAAAAAANNSARSSNSPAGNLEPSTNNAGVHMTNASMNP------NVNPSY 131
Query: 686 PIFIP 700
P+FIP
Sbjct: 132 PVFIP 136
>SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase
Srk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 580
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 78 ARHGHYDKGGHNKPVHFERSKC 13
+RH H+ + H P + RSKC
Sbjct: 64 SRHAHFHETVHENPSEYSRSKC 85
>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 536 TQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLNTSLNPSP 655
T LH + L+ +++ + ++SRN +N S+NPSP
Sbjct: 6 TSLH-KGFGLDINSQRVFGAQAAISRNNYSKVNASINPSP 44
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 26.6 bits (56), Expect = 4.1
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Frame = +2
Query: 440 NNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNS-------TKLSHNIK 598
N+ + S +T+ P + + S + TTQ H+ IS +S KLS+
Sbjct: 602 NSPIMRTSTKSTSPIPARPFYAQSGSLQSLNTTQ-HSHQISGGHSGRMNVPYAKLSYTSH 660
Query: 599 PSLSRNTNHNLNTSLNPSPGINLNLSTNLPIFIPVY 706
+N N++ + P +N +LP+F P +
Sbjct: 661 NGRHGGSNGNISGAKTPMTNYTINSMPSLPVFPPAF 696
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/79 (26%), Positives = 39/79 (49%)
Frame = +2
Query: 464 PVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLNTSL 643
P ++++S +T ST S + +T L + S +ST +I ++S + + + TSL
Sbjct: 110 PSSSSSSAASSTTSTTSSSSLVSSTTLTSSSPSAVSSTTSIPSISSTISSSVSTSSFTSL 169
Query: 644 NPSPGINLNLSTNLPIFIP 700
+ S + STN +P
Sbjct: 170 SSSGFSTVLSSTNTTSALP 188
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 26.6 bits (56), Expect = 4.1
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 479 ASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKP---SLSRNTNHNLNTSLNP 649
A M +S + +N + + D SL +LS+ + S++RNTN +++P
Sbjct: 102 AVDMYFDESFNIKNSNPDSESQKDTDASLTQMDQLSNTVSVKDLSINRNTNKKALNAVSP 161
Query: 650 SPGINLNLSTN 682
S LNLS+N
Sbjct: 162 S----LNLSSN 168
>SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 385 PDPRYNSPDYKAPQYSAPQQYVSQAQPRNYGGKPN 489
P P + Y P YS PQ +Q Q N G N
Sbjct: 84 PPPNTGANSYGNPNYSGPQLPNTQTQSYNLAGGGN 118
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 26.2 bits (55), Expect = 5.4
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 440 NNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNT 619
N S+ T SP+ T + S ++ R Q +L+ +SH L+ ++
Sbjct: 329 NRFSQMRELYTAKPSPITTKVVSRPSQSDVREPQEQVPSKNLHRGADMSHLAAQMLTHSS 388
Query: 620 NHNLNTSLNPSPGI 661
+ T+L PS GI
Sbjct: 389 KKSHTTNLIPSEGI 402
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 566 NNSTKLSHNIKPSLSRNTNHNLNTSLNPSPGINLNL 673
++S IKPS S + + + SL SPGI N+
Sbjct: 332 HSSDNALEQIKPSYSADPSSSTGASLTESPGIPPNI 367
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 261 IYRSEWP-EEDSELHRRQKWIPSRWRS 338
I ++EW EED +L K +P++WR+
Sbjct: 56 IKKTEWSREEDEKLLHLAKLLPTQWRT 82
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 25.8 bits (54), Expect = 7.1
Identities = 15/73 (20%), Positives = 30/73 (41%)
Frame = +2
Query: 407 QITRHHNIVRHNNTSRKHSPVTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLS 586
+ TRH N+ RH K P+ +K +L + + HN + +K
Sbjct: 39 RFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLL---KRHIQRFHNDKSVIEEGSKDV 95
Query: 587 HNIKPSLSRNTNH 625
++K + S+ ++
Sbjct: 96 LDVKAAASQQEDN 108
>SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 118 GDPKTAAIVQEARYLSGNGAFGAAYQQEDGINFKEETDAEG 240
GD KT +Q+A+ + NG E+ + F+EE +G
Sbjct: 111 GDAKT---IQKAKEVGANGFIIVDLPPEEAVGFREECKKQG 148
>SPBC3E7.16c |leu3|SPBC4F6.03c|2-isopropylmalate
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 584
Score = 25.4 bits (53), Expect = 9.4
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = -3
Query: 721 YIELVVHRYKYW*IGTEVEIDTGAGVQA 638
Y+E++ + +W +G + ++ T AG++A
Sbjct: 544 YVEIIFNNTSFWGVGIDADV-TSAGLKA 570
>SPCC622.21 |wtf12||wtf element Wtf12|Schizosaccharomyces pombe|chr
3|||Manual
Length = 197
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/53 (24%), Positives = 21/53 (39%)
Frame = +2
Query: 566 NNSTKLSHNIKPSLSRNTNHNLNTSLNPSPGINLNLSTNLPIFIPVYNKLNIV 724
NN T L ++ T H ++ P P N + LP + + N+V
Sbjct: 3 NNYTSLKSSVDEEDELKTGHEIDLEKGPLPEHNSEGESTLPPYSDISKLANLV 55
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.4 bits (53), Expect = 9.4
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +2
Query: 467 VTTAASPMKTTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLNTSLN 646
VTT + +T+++ S T+ T + + +NST + + P+ S NT T++
Sbjct: 44 VTTTSFSSASTETSTHSVTSTNITSIVPPPSTSHNST--TTTVPPTTSMNT----TTTVP 97
Query: 647 PSPGINLNLSTNLP 688
P+ +N +T P
Sbjct: 98 PTTSLNTTTTTAPP 111
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.132 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,763,538
Number of Sequences: 5004
Number of extensions: 54865
Number of successful extensions: 205
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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