Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0149
(792 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1284 + 25463476-25463557,25465088-25465220,25465307-254653... 35 0.085
02_03_0196 + 16246729-16246859,16247133-16247304 33 0.26
01_05_0072 + 17891199-17892279,17893751-17893884,17893966-178941... 32 0.60
11_04_0048 + 12792270-12792276,12793453-12793697,12793866-12794741 31 0.79
03_05_0696 - 26856413-26856416,26857917-26858524,26859041-268591... 30 1.8
08_01_0178 - 1509100-1511214 30 2.4
06_01_0850 - 6472213-6473541,6474229-6474282,6474616-6474671,647... 29 3.2
09_01_0018 - 391827-392254,392553-392608,393976-394005,394666-39... 29 4.2
07_03_1690 - 28716998-28717091,28717203-28717897,28718264-287184... 29 4.2
08_01_0177 + 1504472-1505033,1505035-1506647 29 5.6
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 29 5.6
01_06_0789 - 32010131-32010330,32010438-32010866,32011658-320117... 29 5.6
11_04_0474 + 18162538-18163731,18163800-18163855,18163951-181640... 28 7.4
08_01_0333 + 2977397-2977648,2978416-2978784,2980108-2980169,298... 28 7.4
04_01_0129 + 1408408-1409055,1409107-1410013,1410145-1410294,141... 28 7.4
01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387 28 7.4
04_04_0079 + 22586803-22586923,22592541-22592860,22592991-225936... 28 9.8
04_03_0091 - 11043023-11043090,11043458-11043566,11044431-110445... 28 9.8
03_04_0205 - 18485933-18488446 28 9.8
01_07_0306 + 42638683-42638990,42639074-42639314,42639935-426402... 28 9.8
>07_03_1284 +
25463476-25463557,25465088-25465220,25465307-25465378,
25465476-25465544,25465629-25465700,25465792-25465860,
25466155-25466220,25466299-25466364,25466452-25466786,
25466931-25467214,25467796-25468067,25468152-25468287,
25468625-25468755,25468890-25469046,25469185-25469327,
25470105-25470190,25471530-25472962,25474563-25474712,
25475221-25475322,25475467-25475568
Length = 1319
Score = 34.7 bits (76), Expect = 0.085
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 385 PDPRYNSPDYKAPQYSAPQQYVSQAQPRNYGGKPNEDDGQYYPEL 519
P P Y SP YK+P Y +PQ A P DDG+ + +L
Sbjct: 223 PPPPYQSPPYKSPPYKSPQSR-QPAPPTTTVNNNPSDDGRKHSKL 266
>02_03_0196 + 16246729-16246859,16247133-16247304
Length = 100
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -3
Query: 694 KYW*IGTEVEIDTGAGVQAGIEVVVGIAAEAGLDIVAELGTVVEADISV 548
+Y IG + I G G+ GI + +GI G+D+ ++ V+ D+ V
Sbjct: 44 RYIGIGIGIGIGIGIGIGIGIGIGIGIGIGIGIDVDVDVDVDVDVDVDV 92
>01_05_0072 +
17891199-17892279,17893751-17893884,17893966-17894115,
17894207-17894524
Length = 560
Score = 31.9 bits (69), Expect = 0.60
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -2
Query: 242 LPSASVSSLKLMPSSCW*AAPNAP-FPLRYRASCTIAAVLGSPAYLGTRLAPSCCWHDTA 66
LPSA+ + S CW A + P F R+RA T + +LG G+ P +H A
Sbjct: 18 LPSAASLQRAALASKCWLAVASGPDFLRRFRARHTSSPLLGLFVSHGSSGLP--VFHPAA 75
Query: 65 TMTKADTISLYILNG 21
T+ + +L G
Sbjct: 76 TVRSDPDLGAAVLGG 90
>11_04_0048 + 12792270-12792276,12793453-12793697,12793866-12794741
Length = 375
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 515 SYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLNTSLNPSPGINLNLSTN 682
S NK TT++ N IS S K+ H+++ ++ + L + +N NL+ + +
Sbjct: 169 SILNKMTTEMENPQISQETSEKVIHSVESNVIKTNGTELCSKVNIDFNTNLSATAS 224
>03_05_0696 -
26856413-26856416,26857917-26858524,26859041-26859101,
26859181-26859557,26860314-26861156
Length = 630
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 545 HNRDISL-NNSTKLSHNIKPSLSRNTNHNLNTSLNPSPGINLNLSTNLPIFIPVY 706
HN L +N T S I+ L N HN + S+ P+PG L+LS N I P Y
Sbjct: 110 HNAGADLIHNDTHSSAQIEFGLLNN--HN-SMSVAPAPGQGLSLSLNTHILAPSY 161
>08_01_0178 - 1509100-1511214
Length = 704
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 79 QQHEGARRVPKYAGDPKTAAIVQEARYLSGNGAFGAAYQQ 198
+Q AR P AGD + AA++ E R LS A Y+Q
Sbjct: 568 RQEALARSAPGLAGDARCAALLSELRELSARVASRREYEQ 607
>06_01_0850 -
6472213-6473541,6474229-6474282,6474616-6474671,
6474824-6476012
Length = 875
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 668 NLSTNLPIFIPVYNKLNIVVFKLNKNTRLL 757
+L+TNL ++PV+ L+ ++ L KN+ LL
Sbjct: 630 SLATNLAFWLPVFGSLDSILRALRKNSSLL 659
>09_01_0018 -
391827-392254,392553-392608,393976-394005,394666-394736,
394819-394948,397627-397717,397798-397919,398014-398303
Length = 405
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 679 GTEVEIDTGAGVQAGIEVVVGIAAEAGLDIVAELGTVVE 563
G E EI+T ++ GIE+ +GI E I E+ T VE
Sbjct: 278 GKETEIETVKEIETGIEIGIGIGIET--VIAYEMRTTVE 314
>07_03_1690 -
28716998-28717091,28717203-28717897,28718264-28718446,
28718552-28719585,28719805-28719978,28720051-28720168,
28720339-28720521,28720647-28720739,28720981-28721166,
28722247-28722507
Length = 1006
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 425 NIVRHNNTSRKHSPVTTAASPMKTT 499
N ++ +NTS+ SP T A+SP+KT+
Sbjct: 895 NGLQESNTSQPSSPATEASSPIKTS 919
>08_01_0177 + 1504472-1505033,1505035-1506647
Length = 724
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 79 QQHEGARRVPKYAGDPKTAAIVQEARYLSGNGAFGAAYQQ 198
+Q AR + AGD + AA+V E R LS A Y+Q
Sbjct: 623 RQEALARSARRLAGDARCAALVSELRELSARVANRREYEQ 662
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 608 SRNTNHNLNTSLNPSPGINLNLST 679
+RNTNHN N SLN + L+ S+
Sbjct: 1644 ARNTNHNTNLSLNHETAVPLSRSS 1667
>01_06_0789 -
32010131-32010330,32010438-32010866,32011658-32011752,
32011836-32011933,32012586-32012942,32013615-32013792,
32013856-32013936,32014441-32014548,32014916-32015178
Length = 602
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 70 VSCQQHEGAR-RVPKYAGDPKTAAIVQEARYLSGNGAFGAA 189
+ C+ EG+ R + GD K + +Q+A + NGA GAA
Sbjct: 254 MDCKNFEGSEERKALFQGDHKNSIHMQQAANAAVNGAIGAA 294
>11_04_0474 +
18162538-18163731,18163800-18163855,18163951-18164011,
18164107-18165495,18166024-18166635,18166706-18166852,
18166941-18167209,18167322-18167412,18167500-18167757,
18168376-18168450,18168937-18168945
Length = 1386
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 548 NRDISLNNSTKLSHNIK--PSLSRNTNHNLNTSLNPSPGINLNLSTN 682
N++ L N+T +HNI+ +L+ N N+ N S SPGI TN
Sbjct: 764 NQNTRLGNNTTGNHNIRTDSTLASNLNNTTNNS-GTSPGIVQAPQTN 809
>08_01_0333 +
2977397-2977648,2978416-2978784,2980108-2980169,
2980271-2980418
Length = 276
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3
Query: 637 GIEVVVGIAAEAGLDIVAELGTVVEADISVVELRSSLVRIA 515
G E +VG+AA AGL +VA + +VV S + SL A
Sbjct: 111 GAETLVGVAASAGLAVVAVVLSVVHISGSHLNPAVSLAMAA 151
>04_01_0129 +
1408408-1409055,1409107-1410013,1410145-1410294,
1419174-1419634,1419683-1419999,1420114-1420477
Length = 948
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +1
Query: 82 QHEGARRV-PKYAGDPKTAAIVQEARYLSGNGAFGAAYQQEDGI--NFKEETDAEGNRKG 252
+H+ R PK+ A+V++ + + GNG + EDG+ K+ +A + K
Sbjct: 477 EHKADHRTKPKHRSGKTVFAMVKDLKIVFGNGPGSQPIESEDGVYGKLKDTLEACNDLKH 536
Query: 253 SYSYID--PSGQRKTVNYIA 306
D P ++K ++Y++
Sbjct: 537 MEQRGDLHPEPKKKGIHYLS 556
>01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387
Length = 244
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 263 YE*LPFLLPSASVSSLKLMPS 201
YE LP +LP V+S++LMPS
Sbjct: 180 YEPLPVMLPPPPVASMQLMPS 200
>04_04_0079 +
22586803-22586923,22592541-22592860,22592991-22593623,
22593717-22594166
Length = 507
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = -3
Query: 679 GTEVEIDTGAGVQAGIEVVVGIAAEAGLDIVAELG 575
GTE D G GV A + V IAA GL ++G
Sbjct: 4 GTEAARDYGGGVTASVVVTCLIAASCGLIFGYDIG 38
>04_03_0091 -
11043023-11043090,11043458-11043566,11044431-11044577,
11044678-11044776,11044857-11044982,11045448-11045582,
11046391-11046468,11046553-11046678,11046828-11046968
Length = 342
Score = 27.9 bits (59), Expect = 9.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 261 IYRSEWPEEDSELHRRQKWIPSRW 332
+ S+ +D+ELHR W+P W
Sbjct: 76 VLESQACADDNELHRMHTWLPDGW 99
>03_04_0205 - 18485933-18488446
Length = 837
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 482 SPMKTTDSTILSYTNK-RTTQLHNRDISLNNSTKLSHNIKPSLSRNT 619
S +++ D T ++ + +T L N +SL +S ++ H IKPS+ T
Sbjct: 560 SNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYT 606
>01_07_0306 +
42638683-42638990,42639074-42639314,42639935-42640236,
42640431-42640607,42640853-42641617,42641697-42641791,
42641889-42641951,42642047-42642135,42642229-42642324,
42642457-42643104,42643596-42643628,42643838-42643912,
42644442-42644603,42644604-42644674,42644758-42644815,
42645196-42645394,42645487-42645552,42645699-42646183
Length = 1310
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +2
Query: 536 TQLHNRDIS-LNNSTKLSHNIKPSLSRNTN-HNLNTSLNPSPGINLNLSTNLP 688
T + + D+S L + ++ +S++++ HNLNTS N S +++ +++LP
Sbjct: 667 TFISSEDLSFLKHQITFLEELEMGMSKSSDEHNLNTSTNYSGPLSMGQNSSLP 719
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.132 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,729,278
Number of Sequences: 37544
Number of extensions: 390477
Number of successful extensions: 1262
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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