Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0148
         (724 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    24   1.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.9  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.9  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 618 DDAPVGPARLHHARDHTHRRQQPDRVHDRPQALQ 719
           D  P+  +++HH     H   QP +   + QA Q
Sbjct: 159 DSPPLVESQMHHQMHTQHPHMQPQQGQHQSQAQQ 192


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = -2

Query: 522 GSGLALHHGVDGLQVRGVRANSQSNVLVGNAIQTLDVRAQVIFHVAGT 379
           G GLA +  ++  +      N     +VG    +LD+R + +    GT
Sbjct: 394 GDGLARYEILNFRKSEHNGTNGYQYQVVGKWFNSLDIRTEELIWARGT 441


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 444 LVGNAIQTLDVRAQVIFHVAGTIILSFETGELCEQLVQRLTAHVREYV 301
           L   AIQ L V  +  F   G   + F      ++++  L  HVR+++
Sbjct: 50  LAKKAIQVLGVTEKEFFDQMGVHFVGFVGQYGYDRVLSVLGRHVRDFL 97


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = -2

Query: 522 GSGLALHHGVDGLQVRGVRANSQSNVLVGNAIQTLDVRAQVIFHVAGT 379
           G GLA +  ++  +      N     +VG    +LD+R + +    GT
Sbjct: 484 GDGLARYEILNFRKSEHNGTNGYQYQVVGKWFNSLDIRTEELIWARGT 531


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,974
Number of Sequences: 438
Number of extensions: 4185
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)