Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0146
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.79 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    24   1.4  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.2  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +2

Query: 419 DFNLSSEDMNKIGTFNKEKRTVGMSFWQDHPYYPFEKSDQVHD 547
           DF  S  D      + +E   + +  W  H  YPFE + ++ D
Sbjct: 182 DFTASDLDEEHRVAYWREDIGLNLHHWHWHLVYPFEGAREIVD 224


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 353 KGVVPIPKSVKKNRIEENIDVFDFN 427
           K ++ I   +KKN  ++N DVF F+
Sbjct: 130 KSLIYIDMIIKKNVTQQNSDVFIFD 154


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 299 QWPRAWGRRGVLRVSCRGTSGRTG 228
           QWP AWG   + R S   TS  TG
Sbjct: 80  QWPFAWG--SLXRSSSPQTSAPTG 101


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 167 LGQDKLIDYCKRNGIVVMAFSPFGPMFHDSLP 262
           LG++ +     R+ I  M  S   PM HD LP
Sbjct: 342 LGENMMDMSLTRHQISSMGHSHAHPMHHDMLP 373


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 167 LGQDKLIDYCKRNGIVVMAFSPFGPMFHDSLP 262
           LG++ +     R+ I  M  S   PM HD LP
Sbjct: 342 LGENMMDMSLTRHQISSMGHSHAHPMHHDMLP 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,721
Number of Sequences: 336
Number of extensions: 3473
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)