Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0146
(701 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 5e-33
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 109 3e-24
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 58 5e-09
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_5128| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_9603| Best HMM Match : Extensin_2 (HMM E-Value=0.0058) 29 3.6
SB_3052| Best HMM Match : Peptidase_S8 (HMM E-Value=0) 28 6.4
SB_51012| Best HMM Match : 7tm_1 (HMM E-Value=2e-06) 28 8.4
SB_29271| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 8.4
SB_1519| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 8.4
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 138 bits (333), Expect = 5e-33
Identities = 74/162 (45%), Positives = 104/162 (64%), Gaps = 6/162 (3%)
Frame = +2
Query: 11 DYLDTWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLID 190
D DTWK ME+ + GL K+IG+SNFN+ Q+D I +IKP QVE + L Q KLID
Sbjct: 135 DPCDTWKAMEKLVDEGLVKAIGLSNFNSKQVDDICAIARIKPVANQVECHPLLNQAKLID 194
Query: 191 YCKRNGIVVMAFSPFGPMFHDSLPSIRPD------DPTLVAIAEKHGKSVTQIVLRYLIQ 352
+ K++ I +A+SP G + P +PD DPT+VA+A+++ ++V QI +R+ IQ
Sbjct: 195 HHKKHNIQTIAYSPLGSL---DRPWAKPDDPHVMRDPTMVAMADRYSRTVAQICIRFQIQ 251
Query: 353 KGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKR 478
+GV+ IPKSV RI+ N VFDF LS+EDM I N++ R
Sbjct: 252 RGVLVIPKSVTPERIKSNFQVFDFELSAEDMATIEGLNRDWR 293
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 109 bits (261), Expect = 3e-24
Identities = 56/153 (36%), Positives = 88/153 (57%)
Frame = +2
Query: 23 TWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKR 202
+W+ M + ++ GL +SIG+SNFN ++ + + + P+V Q+EV+ L +L YCKR
Sbjct: 177 SWQAMIDLRSRGLIRSIGVSNFNIQHLEALRQQTGVVPAVNQIEVHPFLQMKELTQYCKR 236
Query: 203 NGIVVMAFSPFGPMFHDSLPSIRPDDPTLVAIAEKHGKSVTQIVLRYLIQKGVVPIPKSV 382
+ I + AFSP + DP L +A+K+ K+ QI++R+ +QKG IPKS
Sbjct: 237 HNITIQAFSPL-------TKGEKLCDPILSYVAKKYNKTTAQILVRWSLQKGYACIPKSA 289
Query: 383 KKNRIEENIDVFDFNLSSEDMNKIGTFNKEKRT 481
+ RI+EN VFDF++ DM I + RT
Sbjct: 290 QLERIKENAKVFDFSIDMADMELIDGLEENYRT 322
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 62.9 bits (146), Expect = 2e-10
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Frame = +2
Query: 20 DTWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCK 199
++WK MEE G +S+G+SNFN ++ ++ + S +Q + K +C
Sbjct: 453 ESWKAMEELHRQGKIRSLGVSNFNVDELQELVNFATVPVSAVQNWFDPFHQDRKARRFCN 512
Query: 200 RNGIVVMAFSPFGPM---FHDSLPSIRPDDPTLVAIAEKHGKSVTQIVLRYLIQKGVVPI 370
++GI + +S G FH + I+ + ++Q+VLR+ I + V I
Sbjct: 513 KHGIRYIGYSTLGTQWVYFHGLKTNPVLQSKVFSEISSHYEYVISQVVLRWAIHQNVTVI 572
Query: 371 PKSVKKNRIEENIDVFDFNLSSEDMNKI 454
P+S I N D +L+ ++ I
Sbjct: 573 PRSRNSRNIYLNFRSLDLSLNENEIEMI 600
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/63 (39%), Positives = 42/63 (66%)
Frame = +2
Query: 20 DTWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCK 199
+TW+ ME GL K+IG+SNF+ +++++LE I P+ QVE++ +L Q+KL ++C
Sbjct: 179 NTWQAMEGLVAKGLCKAIGVSNFSVKRLNKLLETASIVPACNQVELHPYLPQEKLKEFCD 238
Query: 200 RNG 208
G
Sbjct: 239 SKG 241
Score = 55.2 bits (127), Expect = 5e-08
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Frame = +2
Query: 179 KLIDYCKRNGIVVMAFSPFG------PMFH-DSLPSIRPDDPTLVAIAEKHGKSVTQIVL 337
K D+C GI++ A+SP G P + P + ++P + IA KH SV +++L
Sbjct: 280 KCKDFCDSKGILLTAYSPLGNPGRLVPKERLEREPKVM-EEPVIKEIAAKHNCSVARVLL 338
Query: 338 RYLIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDMNKIGTFNKEKR--TVGMSFWQDHP 511
R+ IQ+G +PKS ++ + +N L+ ++M I + +R T G + +
Sbjct: 339 RWGIQRGYPVLPKSTSRDHLHDNFSALGLVLTDDEMAAIKSITTRQRYLTQGWMYAEGEY 398
Query: 512 YYPFE 526
PF+
Sbjct: 399 VDPFD 403
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 53.2 bits (122), Expect = 2e-07
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +2
Query: 47 KNLGLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLIDYCKRNGIVVMAF 226
K GL +S+G+SNF ++ + + G P++ Q+E+N Q+++I YC ++GI V +
Sbjct: 143 KEEGLIRSVGVSNFGVHHLEELRKAGCRTPAINQIEINPFWRQEEIIKYCNKHGITVEGY 202
Query: 227 SP 232
+P
Sbjct: 203 AP 204
>SB_5128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2102
Score = 41.9 bits (94), Expect = 5e-04
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +2
Query: 173 QDKLI-DYCKRNGIVVMAFSPFGPMFHDSLPSIRP--DDPTLVAIAEKHGKSVTQIVLRY 343
QDK YCK N I M +S G M+ P ++ L I +V+Q+VL++
Sbjct: 1331 QDKATRQYCKENNIKYMGYSTLGGMYVREGFDKNPVQNNFELQRIGGVFDATVSQVVLKW 1390
Query: 344 LIQKGVVPIPKSVKKNRIEENIDVFDFNLSSEDM 445
+++ V+ IP+S N I N + L S+ M
Sbjct: 1391 ALEQDVLVIPQSRTPNHIRTNFHLDHVQLDSKQM 1424
>SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 14 YLDTWKGMEEAKNLGLAKSIGISNFNTTQIDRILENGQIKPSVLQVEVNL--HLGQDKLI 187
YLD + E ++ G + I ++NF+T ++ I ++G IK S Q++ +L +K++
Sbjct: 37 YLDALLHLSELQSEGKIQEISLTNFDTNRMQEITDHG-IKISSNQIQFSLIDRRANEKMV 95
Query: 188 DYCKRNGIVVMAF 226
+C +GI ++A+
Sbjct: 96 KFCLDHGISLLAY 108
>SB_9603| Best HMM Match : Extensin_2 (HMM E-Value=0.0058)
Length = 339
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 504 SCQKDIPTVRFSLLNVPILFISSDDKLKSKTSMFSSMRFFLT 379
SC + +V F+ P++F +S L S TS S +R T
Sbjct: 254 SCPPPLNSVMFATSQPPVMFATSQPPLMSATSQLSHVRHLST 295
>SB_3052| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
Length = 1124
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 362 VPIPKSVKKNRIEENIDVFDFN--LSSEDMNKIGTFNKEK 475
VP P+ VKKNR+ +N + N S ++ +GTF +K
Sbjct: 902 VPYPEGVKKNRVPDNGQPWSDNDPGSFRGVHALGTFASDK 941
>SB_51012| Best HMM Match : 7tm_1 (HMM E-Value=2e-06)
Length = 457
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +3
Query: 312 EKALHKSFFGI*SKRG*FQSLNQLRRTALRK 404
EKALH+SF GI S G +N +R+ L K
Sbjct: 312 EKALHESFIGIPSVSGQDGIVNSHKRSKLEK 342
>SB_29271| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 796
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
Frame = -3
Query: 312 PCFSAMATSV------GSSGRIEGKLSWNIGPN 232
P ++ ATS+ GSSGR+ G W +GP+
Sbjct: 553 PDYNIRATSIYAPAYTGSSGRLNGPFGWAVGPD 585
>SB_1519| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 943
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
Frame = -3
Query: 312 PCFSAMATSV------GSSGRIEGKLSWNIGPN 232
P ++ ATS+ GSSGR+ G W +GP+
Sbjct: 528 PDYNIRATSIYAPAYTGSSGRLNGPFGWAVGPD 560
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,689,523
Number of Sequences: 59808
Number of extensions: 430873
Number of successful extensions: 1288
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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