Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0146
         (701 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               27   0.17 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.6  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   3.7  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   4.9  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   4.9  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   4.9  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   4.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.6  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 11/36 (30%), Positives = 25/36 (69%)
 Frame = +2

Query: 83  NFNTTQIDRILENGQIKPSVLQVEVNLHLGQDKLID 190
           N+    +D++LE+G++KP+  +V ++  + + K+ID
Sbjct: 244 NYVYRSVDQVLEDGKLKPN-KKVRISNEMSKVKVID 278


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = +1

Query: 235 RPDVPRQLTLNT--PRRPHAR--GHCRKTRKKRYTN 330
           R D+   +  N+  P RP      H R+TR+ RYTN
Sbjct: 110 RQDIETIIRRNSRYPLRPPQEVISHYRRTRRDRYTN 145


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 206 GIVVMAFSPFGPM 244
           GI++M +SPFG M
Sbjct: 280 GIIIMWYSPFGIM 292


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 80  SNFNTTQIDRILENGQI 130
           + ++   IDRIL+NG+I
Sbjct: 23  TKYDDMDIDRILQNGRI 39


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 117 SNILSICVVLKLDMPIDL 64
           S++L +C+ LKL   ID+
Sbjct: 51  SDVLRVCIKLKLSQLIDV 68


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 117 SNILSICVVLKLDMPIDL 64
           S++L +C+ LKL   ID+
Sbjct: 51  SDVLRVCIKLKLSQLIDV 68


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 80  SNFNTTQIDRILENGQI 130
           + ++   IDRIL+NG+I
Sbjct: 23  TKYDDMDIDRILQNGRI 39


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +1

Query: 214 CYGVFPVRPDVPRQLTLNTPRRPHARGHCRKT 309
           C   F     + R + ++T  RPH    C KT
Sbjct: 153 CERAFEHSGKLHRHMRIHTGERPHKCTVCSKT 184


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,498
Number of Sequences: 438
Number of extensions: 3659
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)