Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0145
         (767 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4A9G2 Cluster: Putative uncharacterized protein; n=5; ...    36   1.1  
UniRef50_A0CGF5 Cluster: Chromosome undetermined scaffold_18, wh...    33   5.9  

>UniRef50_Q4A9G2 Cluster: Putative uncharacterized protein; n=5;
           Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
           protein - Mycoplasma hyopneumoniae (strain J / ATCC
           25934 / NCTC 10110)
          Length = 1973

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +3

Query: 150 IVRRIFIEAYGYCFKFVLKTLVSKQSMHYSNSSIHFSQIFEFMIKNS 290
           +++R+  + Y    KF L   +S  S +Y+N S+ F+ +  F+I+NS
Sbjct: 769 VLKRLLTKLYPLISKFKLSYFISTDSPNYNNFSVFFNSVKGFLIENS 815


>UniRef50_A0CGF5 Cluster: Chromosome undetermined scaffold_18, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_18,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 691

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 23/77 (29%), Positives = 41/77 (53%)
 Frame = +3

Query: 21  LRTNPVYVSLTSRSYRKCYN*VSPVQGVYFVFFFWINLASTYYIVRRIFIEAYGYCFKFV 200
           LR +P Y +   RSY K  N +S + G+  + FF++ L    Y   ++ IE     ++F+
Sbjct: 311 LRKSP-YKTQIYRSYLKIDNLLSNLGGMQQILFFFLGLLLALYNRFQLLIELANKLYEFM 369

Query: 201 LKTLVSKQSMHYSNSSI 251
           L    +K+ MH +N ++
Sbjct: 370 LVEKQAKK-MHENNLNL 385


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,258,133
Number of Sequences: 1657284
Number of extensions: 12550342
Number of successful extensions: 26579
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26567
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)