Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0145
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   1.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.2  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 118 FSGSIWPVHIIL 153
           FSG +WP+ I+L
Sbjct: 16  FSGKLWPISIVL 27


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
 Frame = +3

Query: 108 FVFFFWINLASTYYI---VRRIFIEAYGYCF-KFVLKT 209
           FVF ++I L + YYI   V    I  +GY   KF++ T
Sbjct: 145 FVFCYFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFT 182


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 221 LTNQSFQNEFETITI 177
           LTN +FQN F  I +
Sbjct: 454 LTNMTFQNVFAVINV 468


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 221 LTNQSFQNEFETITI 177
           LTN +FQN F  I +
Sbjct: 454 LTNMTFQNVFAVINV 468


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,070
Number of Sequences: 336
Number of extensions: 3913
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)