Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0145
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92830-6|CAB07359.2|  360|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.     30   2.1  
AL021492-7|CAE17999.1|  282|Caenorhabditis elegans Hypothetical ...    29   3.6  
Z73105-3|CAA97441.2|  205|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical p...    28   6.4  

>Z92830-6|CAB07359.2|  360|Caenorhabditis elegans Hypothetical
           protein F11A5.7 protein.
          Length = 360

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
 Frame = +1

Query: 214 LVSNQCTTQIVAFTFLKFLNL*SRIHV--*KFSEIMYI--LTIIECKNVSILYLYSNTMQ 381
           L  ++C+T+ +A TFL    L   I V   KF  + ++  L  I+C N  +   ++N M 
Sbjct: 48  LFPSKCSTEKLAITFLNMKRLIGSISVAGTKFKNVSFLAGLESIDCGNSLVFISFNNQMV 107

Query: 382 KTNIWFCIRKYTCSTFK 432
           +  +   +   +CS+F+
Sbjct: 108 ELGL-TNLTSISCSSFQ 123


>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical protein
            K04B12.1 protein.
          Length = 1764

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 639  MFTNINYMQMNIKIETS-KTALIRFLFSVITFSFSWCTNV 523
            +FT +   + ++ I TS K+ L   L SV+  +FS+CT V
Sbjct: 1239 IFTIVEAAESDVSISTSEKSMLASLLISVLLRNFSYCTEV 1278


>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
          Length = 1766

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 639  MFTNINYMQMNIKIETS-KTALIRFLFSVITFSFSWCTNV 523
            +FT +   + ++ I TS K+ L   L SV+  +FS+CT V
Sbjct: 1241 IFTIVEAAESDVSISTSEKSMLASLLISVLLRNFSYCTEV 1280


>AL021492-7|CAE17999.1|  282|Caenorhabditis elegans Hypothetical
           protein Y45F10D.14 protein.
          Length = 282

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 564 FSVITFSFSWCTNVYW*LYGGNH 496
           +S+  F  S CT   W L+GGNH
Sbjct: 9   WSIFGFWISSCTGFLWTLFGGNH 31


>Z73105-3|CAA97441.2|  205|Caenorhabditis elegans Hypothetical
           protein R13.2 protein.
          Length = 205

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +1

Query: 532 APTKRKSNNREKKTN*SSF-RSF-NFYIHLHIINIGEHLNLFYIVPVG 669
           +P +RKS  R+     S+  +SF   ++ +   N  E+LN +Y +PVG
Sbjct: 145 SPEQRKSRKRKSSMEGSAMEQSFIPVFVSMQDANGNEYLNEYYSIPVG 192


>Z81030-13|CAB02705.2|  358|Caenorhabditis elegans Hypothetical
           protein C01G10.3 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = +3

Query: 114 FFFWINLASTYYIVRRIFIEAYGYCFKFVLKTLVSKQSMHYSNSSIHFSQIFEFMIKNS 290
           FF W    S   I+  +FI A  Y   + LK   S++S H   +  + +Q F+ + ++S
Sbjct: 186 FFEW----SVLSIIFPLFINAVTYIRFYYLKKRTSRESQHRRKARENVAQFFQTVFQDS 240


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,440,564
Number of Sequences: 27780
Number of extensions: 333874
Number of successful extensions: 793
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)