Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0145
         (767 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.8  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   3.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   5.5  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   9.5  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 217 LTKVFKTNLKQ*P*ASIKIRRTI 149
           L KVFK  L+  P ASI +R+ I
Sbjct: 356 LDKVFKETLRMYPPASILMRKAI 378


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -3

Query: 561 SVITFSFSWCTNVYW*LYGGNHIFI*MFEKHYTINLLN 448
           +V T++ +  T +   LYGGN   I +  +  + +LLN
Sbjct: 111 TVFTYNITNSTPLLKKLYGGNSTIIFLLIRFKSFSLLN 148


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 90  ERLNYNTYDMIY*SDLHKQGWFEGFH 13
           ERL Y    +   S++ K  WF+GF+
Sbjct: 608 ERLGYQKGGI---SEIQKHKWFDGFN 630


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 237 SNSSIHFSQIFEFMIKNSCIEI**NNVYID 326
           SN +IH +  +++   N+C ++  N  YI+
Sbjct: 86  SNKTIHNNNNYKYNYNNNCKKLYYNINYIE 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,750
Number of Sequences: 438
Number of extensions: 4139
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)