Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0143
(361 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 42 2e-05
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 38 4e-04
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 38 6e-04
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 36 0.002
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 36 0.003
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 36 0.003
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 35 0.003
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 35 0.003
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 35 0.003
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 35 0.003
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 35 0.004
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 34 0.006
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 33 0.010
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 33 0.013
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 33 0.013
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 33 0.018
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 33 0.018
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 32 0.023
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 32 0.031
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 32 0.031
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 31 0.041
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 31 0.054
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 30 0.094
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 30 0.12
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 30 0.12
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 30 0.12
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 0.16
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 29 0.16
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 29 0.16
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 29 0.16
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 29 0.22
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 29 0.22
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 29 0.22
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 29 0.22
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 29 0.29
SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr 1|... 29 0.29
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 29 0.29
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 29 0.29
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 28 0.38
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 28 0.38
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 28 0.38
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 28 0.50
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 28 0.50
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 27 0.67
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 27 1.2
SPAC227.07c |pab1||protein phosphatase regulatory subunit Pab1|S... 27 1.2
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 27 1.2
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 27 1.2
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 26 1.5
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 26 1.5
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 26 2.0
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 25 2.7
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 25 2.7
SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 25 3.5
SPCC777.08c |||HbrB family protein|Schizosaccharomyces pombe|chr... 25 3.5
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 25 3.5
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 25 4.7
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 24 6.2
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 24 8.2
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 24 8.2
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 24 8.2
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 42.3 bits (95), Expect = 2e-05
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 311 WNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASL 162
WN T + + AH + I FD A T S+DRT+KVW+++ S+
Sbjct: 161 WNGTTFERLKRIEAHQSHVKGITFDPAGKYFATESDDRTIKVWRVSDFSI 210
Score = 28.3 bits (60), Expect = 0.38
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQA 168
++ H G++ + F L + S+DR V +W +A
Sbjct: 70 MSTHTGTVTSVRFSPNGQYLASGSDDRVVIIWHKEEA 106
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 38.3 bits (85), Expect = 4e-04
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -3
Query: 320 LRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASLRSI 153
+R WN+ T Q A L H + + FD+ L++ S D+T+++W + SI
Sbjct: 295 IRLWNLATFQQVALLEGHSSGVTCLQFDQCK--LISGSMDKTIRIWNYRTSECISI 348
Score = 31.1 bits (67), Expect = 0.054
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
L H G +N + +L+ S+D T+K+W L
Sbjct: 388 LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSL 421
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 37.5 bits (83), Expect = 6e-04
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -3
Query: 320 LRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
++ W+ ++ + L H ++ DI + T+LTAS D T+K+W L
Sbjct: 198 IQLWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASSDATIKLWSL 245
Score = 32.7 bits (71), Expect = 0.018
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWK 180
+ AH +NDI S +++ S D TVK+WK
Sbjct: 75 IQAHSAWVNDIALTHDSEGVISCSSDSTVKLWK 107
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 35.9 bits (79), Expect = 0.002
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASLRSICSFFVQ 135
L H+ +I I F+ + LL+ S DR++++W +T SL +C F+ +
Sbjct: 97 LEGHEHNIPCITFNSSGTLLLSGSIDRSLQIWDIT--SLSCLCKFYTK 142
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 35.5 bits (78), Expect = 0.003
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = -3
Query: 332 GSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASLRSI 153
GSG ++ N +T A L H + + E NTL++ S D+TV+VW + +A I
Sbjct: 369 GSGTIQIHNAITGVLEARLEGHKEGVWAVKIHE--NTLVSGSIDKTVRVWNIEKAKCTHI 426
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 35.5 bits (78), Expect = 0.003
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -3
Query: 320 LRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQAS-LRSICSF 144
+R W++ + A H I + F+ + LL+ S D+TV+VW + + S +R+I F
Sbjct: 171 VRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVF 230
Score = 32.3 bits (70), Expect = 0.023
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -3
Query: 356 NSLLXIXEGSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTAS--EDRTVKVW 183
N+LL G+++ W++ H G I+ + F + NT + AS +D V++W
Sbjct: 115 NTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLW 174
Query: 182 KLTQASLRSICSF 144
L S RS+ F
Sbjct: 175 DLN--SSRSMAVF 185
Score = 32.3 bits (70), Expect = 0.023
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
+ AHD +N I + + +AS+D+T+K+W
Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLW 492
Score = 31.9 bits (69), Expect = 0.031
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -3
Query: 332 GSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLT 174
G +R WN+ T L H G+I + + +++A+ D VKVW L+
Sbjct: 527 GDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLS 579
Score = 26.6 bits (56), Expect = 1.2
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -3
Query: 320 LRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL-TQASLRSI 153
++ W+ T L H + F+ S L + S DRT+++W + TQ ++++
Sbjct: 489 IKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTL 545
Score = 23.8 bits (49), Expect = 8.2
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQA 168
+ AH+ + + D + L T + VKVW + A
Sbjct: 99 MKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGA 135
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 35.1 bits (77), Expect = 0.003
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -3
Query: 329 SGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
SG L +++ + + + AHDG+I D+ TAS D TVK+W L
Sbjct: 456 SGELEVYDIASSSLIERIQAHDGAIWDLAVGHDGTYFATASADHTVKLWSL 506
Score = 27.5 bits (58), Expect = 0.67
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 272 AHDGSINDIYFDEASNTLLTASEDRTVKVW 183
AH SI ++ F + T S+DR V+ W
Sbjct: 616 AHQDSIMEVTFQPDTYNFFTCSKDREVRYW 645
Score = 26.2 bits (55), Expect = 1.5
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
LN H ++ + FD+ L + S D + VW +
Sbjct: 100 LNGHKSAVTTMDFDKMGTRLASGSMDTDIIVWDI 133
Score = 25.4 bits (53), Expect = 2.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 251 DIYFDEASNTLLTASEDRTVKVWKL 177
DI +D S L+T S D+ VK+W L
Sbjct: 583 DISYD--SKLLVTCSADKNVKIWGL 605
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 35.1 bits (77), Expect = 0.003
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -3
Query: 326 GVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNT--LLTASEDRTVKVWKL-TQASLR 159
G ++ W+ + N L AHD +N + + A + L+TA +D +KVW T+A +R
Sbjct: 164 GTVKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVR 222
Score = 32.7 bits (71), Expect = 0.018
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -3
Query: 323 VLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASL 162
+++ W+ T A L H +++ +F +++ SED TVK+W SL
Sbjct: 209 LIKVWDYQTKACVRILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYSL 262
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 35.1 bits (77), Expect = 0.003
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -3
Query: 323 VLRQWNML-TVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
++R W++ T+ + L H S+ I F S+ LL+ S D+T+KVW+L
Sbjct: 466 IIRVWSVSGTLVER--LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWEL 513
Score = 29.5 bits (63), Expect = 0.16
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 272 AHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASLRSICS 147
+ D + I F L+T +EDR +K+W L+ +R + S
Sbjct: 358 SRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFS 399
Score = 26.6 bits (56), Expect = 1.2
Identities = 10/46 (21%), Positives = 22/46 (47%)
Frame = -3
Query: 320 LRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
++ W++ T + H+ I + F +++ S DRT ++W
Sbjct: 384 IKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLW 429
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 35.1 bits (77), Expect = 0.003
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLT 174
L H S+N + + + ++TAS DRT++ W +T
Sbjct: 343 LRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDIT 377
Score = 26.6 bits (56), Expect = 1.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
L H GS+ + F N L++ S D T+ +W
Sbjct: 257 LYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIW 288
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 34.7 bits (76), Expect = 0.004
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = -3
Query: 350 LLXIXEGSGVLRQWNMLTVAQNA*LNAHDGSINDIYF-DEASNTLLTASEDRTVKVWKLT 174
LL + +G+++ +++ T + L+AH ++ F A+ T L+ S+D+TVKVW L+
Sbjct: 95 LLLAGDATGLVQIFDLSTRSILRALDAHQFPVHVTQFCPYANTTFLSGSDDKTVKVWDLS 154
Query: 173 QASLR 159
+++
Sbjct: 155 TGAVQ 159
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 34.3 bits (75), Expect = 0.006
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -3
Query: 326 GVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
G ++ W+ LT L H I+ + + S L +AS+D+T+++W
Sbjct: 76 GTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIW 123
Score = 25.4 bits (53), Expect = 2.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASLRSICSFF 141
L H+ S+ + + T+S D T+K+W + + R C+ F
Sbjct: 50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIW--SALTFRLECTLF 93
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 33.5 bits (73), Expect = 0.010
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 302 LTVAQNA*LNAHDGSINDIYFDEASNT---LLTASEDRTVKVWKLTQAS 165
+ QN + AHD ++ + F EA T L T S D+T+K W L Q++
Sbjct: 103 IQTGQNQQVAAHDDAVRCVRFVEAMGTSPILATGSWDKTLKYWDLRQST 151
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 33.1 bits (72), Expect = 0.013
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -3
Query: 272 AHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
AH I + F TL TAS D+TVKVW +
Sbjct: 330 AHSEYITSLDFSHPFGTLATASTDKTVKVWDM 361
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 33.1 bits (72), Expect = 0.013
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -3
Query: 275 NAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
+AHD SI + ++ + LLTAS D TVK+W
Sbjct: 385 HAHDNSIVALRYNLRISLLLTASSDTTVKLW 415
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 32.7 bits (71), Expect = 0.018
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASLRSI 153
L H+G + F+ +TL+T S DRTV+VW L + +
Sbjct: 442 LEEHEGDVWT--FEYVGDTLVTGSTDRTVRVWDLRTGECKQV 481
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 32.7 bits (71), Expect = 0.018
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = -3
Query: 311 WNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQAS 165
W++ T L H+G ++ + F+ + + L + S D+TV++W + S
Sbjct: 452 WSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRS 500
Score = 23.8 bits (49), Expect = 8.2
Identities = 9/50 (18%), Positives = 23/50 (46%)
Frame = -3
Query: 326 GVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
G L W + + +H +++ + + ++T ++D +KVW +
Sbjct: 319 GQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDM 368
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 32.3 bits (70), Expect = 0.023
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLT 174
L HD +N F +L+A +DR VK+W++T
Sbjct: 208 LEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMT 242
Score = 29.5 bits (63), Expect = 0.16
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -3
Query: 269 HDGSINDIYFDEASNTLLTASEDRTVKVWKLTQ 171
H +++ F +L+ASED+T++VW L +
Sbjct: 255 HFNNVSCCLFHPHQELILSASEDKTIRVWDLNR 287
Score = 28.7 bits (61), Expect = 0.29
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = -3
Query: 320 LRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASLRS 156
+R WN + A L H + F + + +++AS D+TV+VW ++ +++
Sbjct: 119 IRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKN 173
Score = 25.8 bits (54), Expect = 2.0
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -3
Query: 275 NAHDGSINDIYFDEASNTLLTASEDRTVKVWKL-TQASLRSIC 150
+ HDG + I F ++ +D V VW ++ L S+C
Sbjct: 50 DGHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLC 92
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 31.9 bits (69), Expect = 0.031
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3
Query: 359 GNSLLXIXEGSGVLRQWNMLTVA-QNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
G +L G L W++ QN NAH GS+ I F L+TA D ++K W
Sbjct: 257 GTPILASSNPIGDLSFWDLSKRRIQNVTYNAHFGSLPKIQFLNGQPILVTAGPDNSLKEW 316
Score = 26.6 bits (56), Expect = 1.2
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -3
Query: 269 HDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASL 162
H + F + L+TAS D T++ W L L
Sbjct: 571 HSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPTGHL 606
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 31.9 bits (69), Expect = 0.031
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 335 EGSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
+ G++ W++ T + + H G+I + F S L++ D TV+ W
Sbjct: 524 DSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAW 574
Score = 29.1 bits (62), Expect = 0.22
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -3
Query: 317 RQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
R W++ T H G + D+ F + TAS D+T ++W
Sbjct: 404 RLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLW 448
Score = 25.4 bits (53), Expect = 2.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
L +H G + F + LL+ SED + ++W +
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSV 408
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 31.5 bits (68), Expect = 0.041
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
L H+G+ D+ F L + SEDRT+++W +
Sbjct: 190 LVGHEGACFDLKFSSDGRYLCSVSEDRTLRLWSI 223
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 31.1 bits (67), Expect = 0.054
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
+ AH+ + D+ F + +TAS+D ++KVW
Sbjct: 160 VQAHEMEVRDVAFSPNDSKFVTASDDGSLKVW 191
Score = 24.6 bits (51), Expect = 4.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -3
Query: 272 AHDGSINDIYFDEASNTLLTASEDRTVKVW 183
AHD I + + + L T S D+T + W
Sbjct: 358 AHDLGIWSMQYHPLGHLLCTGSNDKTTRFW 387
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 30.3 bits (65), Expect = 0.094
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -3
Query: 341 IXEGSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASL 162
+ GS V+ W++ T + + L H +I + + LLTAS D +W L S+
Sbjct: 43 LVNGSVVI--WDLSTFSVSRVLTGHTRAIQSVCWSSCDRFLLTASRDWKCILWDLRDGSI 100
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 29.9 bits (64), Expect = 0.12
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -3
Query: 326 GVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQAS 165
G R W+ T + H+ I D+ F TAS D+T ++W + A+
Sbjct: 425 GFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEHAA 478
Score = 29.5 bits (63), Expect = 0.16
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = -3
Query: 359 GNSLLXIXEGSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWK 180
G SL E SG+++ W++ + Q+ H + + F + L++ D V W
Sbjct: 541 GLSLASADE-SGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWD 599
Query: 179 LT 174
LT
Sbjct: 600 LT 601
Score = 27.9 bits (59), Expect = 0.50
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 317 RQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQAS 165
R W++ T NAH ++ + +L +A E +KVW L ++
Sbjct: 512 RMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSN 562
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 29.9 bits (64), Expect = 0.12
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLL-TASEDRTVKVWKLTQASLR 159
++AH G I+ + F+ ++ +L T S D+T+ +W L + R
Sbjct: 277 VHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQR 317
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 29.9 bits (64), Expect = 0.12
Identities = 13/60 (21%), Positives = 27/60 (45%)
Frame = -3
Query: 356 NSLLXIXEGSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
N++ + +G + W+ + + H G + D+ + ++TA D +KVW L
Sbjct: 235 NAVEHVGHANGQVTLWSPSSTTPLVKMLTHRGPVRDLAVNRDGRYMVTAGADSLLKVWDL 294
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 29.5 bits (63), Expect = 0.16
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 275 NAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
+A+ S N YFD+ N ++ SED V +W L
Sbjct: 489 HANAQSQNRAYFDDDGNYVICGSEDHQVFIWDL 521
Score = 24.2 bits (50), Expect = 6.2
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = -3
Query: 356 NSLLXIXEGSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWK- 180
NS + V+ + + N+ N+ + +I + F L +DR +++W
Sbjct: 208 NSSSPLNRTPSVISDTLAVAITSNSSSNSSNNAIWAMKFSRDGRYLAVGGQDRILRIWAV 267
Query: 179 LTQASLRSICS 147
L RS+ S
Sbjct: 268 LDSEHARSVAS 278
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 29.5 bits (63), Expect = 0.16
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
L H+GS+N + F + +L+ S DRT+ + +L
Sbjct: 306 LPGHEGSVNHVDFHPHQDIILSCSSDRTIFLGEL 339
Score = 25.0 bits (52), Expect = 3.5
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3
Query: 320 LRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTA-SEDRTVKVW 183
L W+ ++ + H G +N + + + LLT+ S+D T+KVW
Sbjct: 117 LMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVW 163
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 29.5 bits (63), Expect = 0.16
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 269 HDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASLR 159
H ++ I F L T+SED TVKVW + S++
Sbjct: 82 HTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQ 118
Score = 27.5 bits (58), Expect = 0.67
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLT 174
L H + D F S L+TAS D ++W+L+
Sbjct: 255 LQGHQRWVWDCAFSADSTYLVTASSDHVARLWELS 289
Score = 24.2 bits (50), Expect = 6.2
Identities = 12/54 (22%), Positives = 23/54 (42%)
Frame = -3
Query: 326 GVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQAS 165
G ++ W+M + + H +ND+ LL+ + V+ W L + S
Sbjct: 105 GTVKVWDMRAPSVQRNYD-HKSPVNDLLIHPNQGELLSCDQSGRVRAWDLGENS 157
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 29.5 bits (63), Expect = 0.16
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 320 LRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
+R W++ L H+ I + F + TL++ S DRTV +W
Sbjct: 358 IRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLW 403
Score = 29.5 bits (63), Expect = 0.16
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
L+ H+ S+ + F L++ S D T+K+W+L
Sbjct: 454 LHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWEL 487
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 29.1 bits (62), Expect = 0.22
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 329 SGVLRQWNM-LTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASLRSI 153
SG+L++W++ L AH+G + + + L + D+T+++W T +S+
Sbjct: 199 SGILQKWDIRFPKLPFLKLAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDSTSNKKKSL 258
Score = 25.0 bits (52), Expect = 3.5
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -3
Query: 356 NSLLXIXEGSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNT-LLTASEDRTVKVWK 180
++L+ G L W++ A N H +++ + + +LTAS+D +K+W
Sbjct: 104 SNLIFTCSPLGNLNVWDVNLEALLYDFNEHSRAVHKLDISSFHPSYVLTASQDGLIKLWD 163
Query: 179 LTQAS 165
++S
Sbjct: 164 YKESS 168
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 29.1 bits (62), Expect = 0.22
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 269 HDGSINDIYFDEASNTLLTASEDRTVKVWKLTQAS 165
H ++ + +N + + S DR++KVW L Q S
Sbjct: 249 HRDAVMGLAMRRGTNEMFSCSADRSIKVWSLDQMS 283
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 29.1 bits (62), Expect = 0.22
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 269 HDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
H G + DI F + + + +D T+K W L
Sbjct: 268 HTGPVMDIVFSDDPSVAYSVGQDHTIKTWDL 298
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 29.1 bits (62), Expect = 0.22
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 269 HDGSINDIYFD-EASNTLLTASEDRTVKVWKLTQ 171
H ++ + FD + S L TAS D+TV+ W L Q
Sbjct: 221 HQSNVYCLLFDPQDSEALWTASADKTVREWSLYQ 254
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 28.7 bits (61), Expect = 0.29
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 269 HDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
HD I+D D L T S D+T+KV+ +
Sbjct: 8 HDDMIHDAILDYYGKRLATCSSDQTIKVFSI 38
>SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 28.7 bits (61), Expect = 0.29
Identities = 13/64 (20%), Positives = 33/64 (51%)
Frame = -3
Query: 356 NSLLXIXEGSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
N LL +G+ ++ ++ + + + H ++ I + ++ + D+T+K+WK+
Sbjct: 78 NLLLSTTKGNKDIQYVSIYDNKRISYFSGHTDIVSSIEVSPIEDQFVSTANDKTLKLWKM 137
Query: 176 TQAS 165
Q+S
Sbjct: 138 NQSS 141
Score = 24.6 bits (51), Expect = 4.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 275 NAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
N H GS F N ++ +++DRT+ VW L
Sbjct: 256 NFHGGSTT---FVPQGNFVIGSADDRTLNVWNL 285
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 28.7 bits (61), Expect = 0.29
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -3
Query: 257 INDIYFDEASNT-LLTASEDRTVKVWKLTQAS 165
IN + F+ A T LLT + DRTVK W +++
Sbjct: 414 INGLEFNRACETRLLTCAMDRTVKFWNYEKST 445
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 28.7 bits (61), Expect = 0.29
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -3
Query: 320 LRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASLR 159
+R W+ T A L H ++ + S L+++S+D T+KVW + ++
Sbjct: 413 VRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMK 466
Score = 24.6 bits (51), Expect = 4.7
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = -3
Query: 359 GNSLLXIXEGSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
G LL +R WN+ L+ H I + + N + ++S D+T+++W
Sbjct: 238 GPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG-GQNWIYSSSYDKTIRIW 295
Score = 23.8 bits (49), Expect = 8.2
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
++ H +N F + TAS D +V++W
Sbjct: 385 MHGHQKVVNHASFSPDGRCIATASFDSSVRLW 416
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 28.3 bits (60), Expect = 0.38
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLL-TASEDRTVKVWKL 177
+ AH +IN + + ++ LL TAS D+TV +W L
Sbjct: 277 IQAHSKAINAVAINPFNDYLLATASADKTVALWDL 311
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 28.3 bits (60), Expect = 0.38
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASL 162
++AH GSI I + S+ +T+S + K+W SL
Sbjct: 227 IDAHKGSIFSISWSPDSSQFVTSSAGYSCKIWDANTGSL 265
Score = 24.6 bits (51), Expect = 4.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 275 NAHDGSINDIYFDEASNTLLTASEDRTVKVWKLT 174
NAH + + + N LL+ D +KVW +T
Sbjct: 562 NAHSLGATQVEW-VSENELLSTGSDAAIKVWSVT 594
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 28.3 bits (60), Expect = 0.38
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -3
Query: 353 SLLXIXEGSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLT 174
SL+ + R W++ + L+ H I + + L T+S D TVK+W L
Sbjct: 320 SLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLR 379
Query: 173 QASL 162
+ SL
Sbjct: 380 KVSL 383
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 27.9 bits (59), Expect = 0.50
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 230 SNTLLTASEDRTVKVWKLTQASL 162
S L TASED T+++W ++ +L
Sbjct: 189 SGRLYTASEDNTIRIWDVSTGNL 211
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 27.9 bits (59), Expect = 0.50
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 269 HDGSINDIYFDEASNTLLTASEDRTVKVW 183
H I D+ F + + L+ S D+T+K+W
Sbjct: 309 HARPIRDLSFSQDGRSFLSTSFDKTIKLW 337
Score = 27.5 bits (58), Expect = 0.67
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 269 HDGSINDIYFDEASNTLLTASEDRTVKVWK 180
H G IN I F E +T S+D +++ W+
Sbjct: 395 HLGGINSITFLENGKRFVTTSDDSSMRFWE 424
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 27.5 bits (58), Expect = 0.67
Identities = 13/61 (21%), Positives = 23/61 (37%)
Frame = -3
Query: 359 GNSLLXIXEGSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWK 180
GN G ++ W++ + L H ++ + L + ED+ VK W
Sbjct: 174 GNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWD 233
Query: 179 L 177
L
Sbjct: 234 L 234
Score = 27.1 bits (57), Expect = 0.88
Identities = 10/40 (25%), Positives = 20/40 (50%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQASLR 159
++ H G + + + + T + DRT+K+W L L+
Sbjct: 159 ISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLK 198
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 26.6 bits (56), Expect = 1.2
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 272 AHDGSINDIYFDEASNTLLTASEDRTVKVWKLTQ 171
A+ +I + F + + + T SED+ +++W TQ
Sbjct: 60 AYGEAIRQVAFSKDYSRMATVSEDKCLRLWDSTQ 93
>SPAC227.07c |pab1||protein phosphatase regulatory subunit
Pab1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 1.2
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -3
Query: 257 INDIYFDEASNT--LLTASEDRTVKVWKLTQASLRSI 153
IN I + + +N L ++ D+T+K+WKL + +L+ +
Sbjct: 92 INKIRWCKRTNRAHFLLSTNDKTIKLWKLYEKNLKVV 128
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 26.6 bits (56), Expect = 1.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 296 VAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
VAQ L H ++D S+ L+AS D+T+++W L
Sbjct: 54 VAQRR-LTGHSHFVSDCALSFDSHYALSASWDKTIRLWDL 92
Score = 25.4 bits (53), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 224 TLLTASEDRTVKVWKLTQASLRS 156
T ++A D+ VKVW L SLR+
Sbjct: 164 TFVSAGWDKAVKVWDLETFSLRT 186
Score = 23.8 bits (49), Expect = 8.2
Identities = 6/31 (19%), Positives = 16/31 (51%)
Frame = -3
Query: 269 HDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
H + + + +++ S D+T+K+W +
Sbjct: 104 HTSDVLSVSISPDNRQVVSGSRDKTIKIWNI 134
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 26.6 bits (56), Expect = 1.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 272 AHDGSINDIYFDEASNTLLTASEDRTVKVWKLT 174
AH+ +I + F + + L T+S D+T KV+ L+
Sbjct: 178 AHNNAIFSVNFSKDDSLLATSSGDQTSKVFDLS 210
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.2 bits (55), Expect = 1.5
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVWK 180
L+ H + + + + + EDRT+++WK
Sbjct: 211 LHGHTSFVYSLTYIHNQQLIASCGEDRTIRIWK 243
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 26.2 bits (55), Expect = 1.5
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 329 SGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASED-RTVKVWKL 177
SG + W+++ Q + AH S+ + F+ L TAS++ R ++V+ +
Sbjct: 167 SGQVILWDVINCKQITKIEAHKDSLACLAFNSDGTMLATASDNGRIIRVFAI 218
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 2.0
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = -3
Query: 311 WNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASEDRTVKVWKL 177
W ++ A L AH + + +++T + D T++ WKL
Sbjct: 364 WKYPSLKNIANLTAHTNRVLYLSMSPDGQSIVTGAGDETLRFWKL 408
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 25.4 bits (53), Expect = 2.7
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -3
Query: 347 LXIXEGSGVLRQWNMLTVAQNA*LNAH-DGSINDIYFDEASNTLLTASEDRTVKVWKLTQ 171
L I +G + WN T H DG I+ + + + TLL + V++ T+
Sbjct: 216 LAIARVNGFVEIWNRKTKNNRCDYKFHHDGDISCMAWSPINWTLLVGGSTGNIYVYRRTK 275
Query: 170 ASLRSI 153
+ +R +
Sbjct: 276 SMMRRV 281
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 25.4 bits (53), Expect = 2.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -3
Query: 269 HDGSINDIYFDEASNTLLTASEDRTVKVW 183
H+ + I + + ++ LLT+S DRTV++W
Sbjct: 254 HNAEVLSISWSK-NDFLLTSSADRTVRLW 281
>SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 25.0 bits (52), Expect = 3.5
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -3
Query: 269 HDGSINDIYFDEASNTLLTASEDRTVKVW 183
H +ND+ +D +++ S D+ VKV+
Sbjct: 13 HQDLVNDVTYDFYGRRMVSCSADQRVKVY 41
>SPCC777.08c |||HbrB family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 422
Score = 25.0 bits (52), Expect = 3.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 153 LFFFCSVLLFFQSDLILIKTK 91
LFFF SVL + Q + IKTK
Sbjct: 297 LFFFSSVLPYVQGVFLPIKTK 317
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 25.0 bits (52), Expect = 3.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 260 SINDIYFDEASNTLLTASEDRTVKVWKL 177
+I+D+ F + + L T + D VKVW +
Sbjct: 301 TISDLCFSKGNLFLYTGAFDNAVKVWDM 328
Score = 24.6 bits (51), Expect = 4.7
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -3
Query: 266 DGSINDIYFDEASNTLLTASEDRTVKVWKL 177
D IN + N +T D VKVW L
Sbjct: 546 DAGINMAQWQPKGNLFVTGGSDGIVKVWDL 575
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 24.6 bits (51), Expect = 4.7
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 278 LNAHDGSINDIYFDEASNTLLTASEDRTVKVW 183
L H G +N + + LL+ S+D + VW
Sbjct: 41 LTGHTGCVNTLDWSADGEFLLSGSDDTRLIVW 72
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 24.2 bits (50), Expect = 6.2
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 257 INDIYFDEASNTLLTASEDRTVKVWKL 177
+ND+ F TL TA D V W +
Sbjct: 236 VNDLKFHPIHQTLATAGGDGVVAFWDI 262
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 23.8 bits (49), Expect = 8.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 264 VVCIQLRVLCYSEHVPLSEHAGPFXN 341
V + R+ Y+EHVPL+ + + N
Sbjct: 24 VYSLSNRIFSYAEHVPLNRYLTQWNN 49
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 23.8 bits (49), Expect = 8.2
Identities = 10/43 (23%), Positives = 19/43 (44%)
Frame = -3
Query: 332 GSGVLRQWNMLTVAQNA*LNAHDGSINDIYFDEASNTLLTASE 204
G G ++ W+ + AH+G + + F + L AS+
Sbjct: 85 GDGAVKLWDASERCERWTSKAHEGIVRGLVFSNQGDVLSCASD 127
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 23.8 bits (49), Expect = 8.2
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -3
Query: 308 NMLTVAQNA*LNAHDGSINDIYF--DEASNTLLTASEDRTVKVWKL 177
N+L A + AH I D + E TAS D+ VK WK+
Sbjct: 610 NLLDYNNFASIKAHSRIIWDASWAPKEMGYFFATASRDKFVKFWKI 655
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,169,161
Number of Sequences: 5004
Number of extensions: 18961
Number of successful extensions: 174
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 110009772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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