Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0140
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.5  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   5.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 603 FLAQSNVPTNSPSRHVILVKIYHVIF 680
           FL  +   TNS   HV L  +YH+ F
Sbjct: 322 FLNITGDKTNSVFEHVKLGSLYHISF 347


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 477 ANLRLGVKHNVTRPPRAPCEQ 539
           A++ L +KH V  P ++P E+
Sbjct: 91  ADVLLSLKHAVVHPGQSPAEK 111


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
          transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 62 SAGFHVAAFICD 27
          +AGFH  AF C+
Sbjct: 12 AAGFHFGAFTCE 23


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +3

Query: 189 PESIEEVRQNAIDDDLALVWHDSQTIREENP 281
           P+S+     N  D  L   W+ +  +  +NP
Sbjct: 367 PDSVYSFINNLTDRKLLSAWYMNTVLGHQNP 397


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +3

Query: 189 PESIEEVRQNAIDDDLALVWHDSQTIREENP 281
           P+S+     N  D  L   W+ +  +  +NP
Sbjct: 259 PDSVYSFINNLTDRKLLSAWYMNTVLGHQNP 289


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = -3

Query: 304 VSTSPAPTGFSSRIV*ESCQTRA 236
           ++ + AP G  +++V +SC+ +A
Sbjct: 120 MANTAAPNGHQTQVVYDSCKLQA 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,478
Number of Sequences: 336
Number of extensions: 2987
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)