Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0139
         (603 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0442 - 21280804-21280897,21281287-21281684                       31   0.93 

>05_04_0442 - 21280804-21280897,21281287-21281684
          Length = 163

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 154 ERRRKKTEEVRQNNRCWRR*STKNQKAKIGKDSCKKREEA 273
           E   + T+ V +NNRC ++ +T  + A    +SC ++  A
Sbjct: 22  ESESRSTDSVSKNNRCGKKAATGRKAAAAAVESCSRKRAA 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,893,640
Number of Sequences: 37544
Number of extensions: 196028
Number of successful extensions: 438
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)