Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0139
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46676-6|CAA86666.1|  503|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z81536-8|CAB04369.2|  352|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AF078783-5|AAC26922.1|  236|Caenorhabditis elegans Hypothetical ...    27   7.8  

>Z46676-6|CAA86666.1|  503|Caenorhabditis elegans Hypothetical
           protein C08B11.8 protein.
          Length = 503

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
 Frame = -3

Query: 421 YF*LMIFVFFLA------SVSIPIRCRIRLVSFHVGNVFLTFTQFLLNVAVSKEAWLLLS 260
           Y  L +FVF LA       +    R  + +  F VG   + +  FLL          +  
Sbjct: 243 YHALPVFVFILARSINKTQLFNSFRRILTIGLFVVGTFLIIWLPFLLTGTAKDVIIRVFP 302

Query: 259 FYKNLYQSSLSGFWC 215
           F + LY+  ++ FWC
Sbjct: 303 FNRGLYEDKVASFWC 317


>Z81536-8|CAB04369.2|  352|Caenorhabditis elegans Hypothetical
           protein F40D4.11 protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -2

Query: 518 SFQLYVVAVFFFSVAIDVIPSPVALRSSFMWMLFLIDDFCIFFGFSL 378
           +FQL  +++   S  + +  +P +++S   W LF+    CI+F FS+
Sbjct: 35  TFQLIALSLQLLSFYVILTKTPASMKS-VKWPLFINHLCCIWFDFSI 80


>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
           protein F36F2.3a protein.
          Length = 1128

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +2

Query: 287 DSYIKKKLSKG*KYVPNMETNKPNATTDRDGD*SQKKYKNHQSKITST*MKTEEQRD 457
           D    KK+ K  K   N + ++     D D +  +KK+K H+ +  S   K +E  D
Sbjct: 760 DDESSKKMKKHKKSKKNKKHHRKEEDGDEDEERKRKKHKKHKKEKKSKKEKRDEDED 816


>U58753-6|AAC24440.1|  705|Caenorhabditis elegans Hypothetical
           protein W03B1.8 protein.
          Length = 705

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 242 PIFAFWFLVLYRLQHLLFCLTSSVFFL 162
           PI+A+W L     Q+LL C   S FFL
Sbjct: 329 PIYAYWKLSCDGNQYLLVCALVSSFFL 355


>AF078783-5|AAC26922.1|  236|Caenorhabditis elegans Hypothetical
           protein H10E21.4 protein.
          Length = 236

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 359 ATTDRDGD*SQKKYKNHQSKITST*MKTEEQRD 457
           A T+RDG  +  ++KNH S    +    EEQR+
Sbjct: 125 ADTNRDGQLTYAEFKNHLSSGAKSLSPAEEQRN 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,054,459
Number of Sequences: 27780
Number of extensions: 201624
Number of successful extensions: 648
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)