Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= an--0139
(603 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 29 0.035
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 29 0.035
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 29 0.035
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 29 0.035
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 3.0
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 3.0
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 3.0
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 3.0
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 3.0
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 3.0
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 3.0
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 4.0
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 4.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.0
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 7.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 9.3
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.1 bits (62), Expect = 0.035
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 315 KVKNTFPTWKLTSLMRQRIGMETEAKKNTKIINQK*HPHK*RPKSNGTRNNIDGDREKKY 494
K + + ++ TS R R E E K KII+ + +K +N NN + + KK
Sbjct: 51 KNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKL 110
Query: 495 SHY 503
+Y
Sbjct: 111 QYY 113
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.1 bits (62), Expect = 0.035
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 315 KVKNTFPTWKLTSLMRQRIGMETEAKKNTKIINQK*HPHK*RPKSNGTRNNIDGDREKKY 494
K + + ++ TS R R E E K KII+ + +K +N NN + + KK
Sbjct: 51 KNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKL 110
Query: 495 SHY 503
+Y
Sbjct: 111 QYY 113
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.1 bits (62), Expect = 0.035
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 315 KVKNTFPTWKLTSLMRQRIGMETEAKKNTKIINQK*HPHK*RPKSNGTRNNIDGDREKKY 494
K + + ++ TS R R E E K KII+ + +K +N NN + + KK
Sbjct: 51 KNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKL 110
Query: 495 SHY 503
+Y
Sbjct: 111 QYY 113
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.1 bits (62), Expect = 0.035
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 315 KVKNTFPTWKLTSLMRQRIGMETEAKKNTKIINQK*HPHK*RPKSNGTRNNIDGDREKKY 494
K + + ++ TS R R E E K KII+ + +K +N NN + + KK
Sbjct: 51 KNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKL 110
Query: 495 SHY 503
+Y
Sbjct: 111 QYY 113
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 303 RN*VKVKNTFPTWKLTSLMRQRIGMETEAKKNTKIINQK*HPHK*RPKSNGTRNNIDGDR 482
+N K + + ++ TS R R E E K KII+ + + +N NN +
Sbjct: 47 QNSYKNEREYRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
Query: 483 EKKY 494
+K Y
Sbjct: 107 KKLY 110
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 303 RN*VKVKNTFPTWKLTSLMRQRIGMETEAKKNTKIINQK*HPHK*RPKSNGTRNNIDGDR 482
+N K + + ++ TS R R E E K KII+ + + +N NN +
Sbjct: 47 QNSYKNEREYRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
Query: 483 EKKY 494
+K Y
Sbjct: 107 KKLY 110
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 303 RN*VKVKNTFPTWKLTSLMRQRIGMETEAKKNTKIINQK*HPHK*RPKSNGTRNNIDGDR 482
+N K + + ++ TS R R E E K KII+ + + +N NN +
Sbjct: 47 QNSYKNEREYRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
Query: 483 EKKY 494
+K Y
Sbjct: 107 KKLY 110
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 303 RN*VKVKNTFPTWKLTSLMRQRIGMETEAKKNTKIINQK*HPHK*RPKSNGTRNNIDGDR 482
+N K + + ++ TS R R E E K KII+ + + +N NN +
Sbjct: 47 QNSYKNEREYRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
Query: 483 EKKY 494
+K Y
Sbjct: 107 KKLY 110
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 303 RN*VKVKNTFPTWKLTSLMRQRIGMETEAKKNTKIINQK*HPHK*RPKSNGTRNNIDGDR 482
+N K + + ++ TS R R E E K KII+ + + +N NN +
Sbjct: 47 QNSYKNEREYRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
Query: 483 EKKY 494
+K Y
Sbjct: 107 KKLY 110
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 303 RN*VKVKNTFPTWKLTSLMRQRIGMETEAKKNTKIINQK*HPHK*RPKSNGTRNNIDGDR 482
+N K + + ++ TS R R E E K KII+ + + +N NN +
Sbjct: 47 QNSYKNEREYRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
Query: 483 EKKY 494
+K Y
Sbjct: 107 KKLY 110
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 3.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 303 RN*VKVKNTFPTWKLTSLMRQRIGMETEAKKNTKIINQK*HPHK*RPKSNGTRNNIDGDR 482
+N K + + ++ TS R R E E K KII+ + + +N NN +
Sbjct: 47 QNSYKNEREYRKYRETSKERSRDRRERERSKEPKIISSLSNNYNYSNYNNYNNNNNYNNY 106
Query: 483 EKKY 494
+K Y
Sbjct: 107 KKLY 110
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 4.0
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +3
Query: 303 RN*VKVKNTFPTWKLTSLMRQRIGMETEAKKNTKIINQK*HPHK*RPKSNGTRNNIDGDR 482
+N K + + ++ TS R R E E K KI++ + + +N NN +
Sbjct: 47 QNSYKNEREYRKYRETSKERSRDRRERERSKEPKIVSSLSNNYNYSNYNNYNNNNNYNNY 106
Query: 483 EKKY 494
+K Y
Sbjct: 107 KKLY 110
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 4.0
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 371 RDGD*SQKKYKNHQSKITST*MKTEEQRD*E*HRWRQRK-KIQPLHKVER 517
R + QK YKN S E RD R R R+ +I P H +E+
Sbjct: 274 RSREREQKSYKNENSYRKYRETSKERSRD-RRERGRSREHRIIPSHYIEQ 322
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -3
Query: 352 LVSFHVGNVFLTFTQFLLNVAVSKEAWLLLSF 257
++S H G V T + K+AW+ SF
Sbjct: 167 VISMHDGLVLYTTPSICTALGYLKDAWIGRSF 198
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.4 bits (43), Expect = 7.0
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = -3
Query: 352 LVSFHVGNVFLTFTQFLLNVAVSKEAWLLLSF 257
++S H G V T + K+AW+ SF
Sbjct: 162 VISMHDGLVLYTTPSICTALGYLKDAWIGRSF 193
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 520 TPPRKTLVHTIYTYL 564
TPP TLV T T+L
Sbjct: 299 TPPSATLVGTTITHL 313
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,737
Number of Sequences: 438
Number of extensions: 2420
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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